Detail information of GWHGAAEX012364/evm.TU.scaffold_42.192


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|134095425|ref|YP_001100500.1|1.00E-86aromatic amino acid aminotransferase [Herminiimonas arsenicoxydans]
KOGKOG14110Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT1/GOT2
nrgi|695034052|ref|XP_009404519.1|0PREDICTED: aspartate aminotransferase, mitochondrial [Musa acuminata subsp. malaccensis]
Swissprottr|P46643|AAT1_ARATH0Aspartate aminotransferase, mitochondrial (Precursor)
trEMBLtr|M0T713|M0T713_MUSAM0Aspartate aminotransferase {ECO:0000256|RuleBase:RU000480}
TAIRAT2G309700aspartate aminotransferase 1

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000005052785715312299+
Transcript Sequence

Network for GWHGAAEX012364

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module2

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00155.20Aminotran_1_2543184.70E-64
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K14455GOT2 Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Microbial metabolism in diverse environmentsmap01120
Biosynthesis of antibioticsmap01130
Carbon metabolismmap01200
2-Oxocarboxylic acid metabolismmap01210
Biosynthesis of amino acidsmap01230
Carbon fixation in photosynthetic organismsmap00710
Pyrimidine metabolismmap00240
Cysteine and methionine metabolismmap00270
Arginine biosynthesismap00220
Arginine and proline metabolismmap00330
Tyrosine metabolismmap00350
Phenylalanine metabolismmap00360
Tryptophan metabolismmap00380
Isoquinoline alkaloid biosynthesismap00950
Fat digestion and absorptionmap04975

Gene Ontology

GO term OntologyName
GO:0009058Biological Processbiosynthetic process
GO:0006520Biological Processcellular amino acid metabolic process
GO:0008483Molecular Functiontransaminase activity
GO:0003824Molecular Functioncatalytic activity
GO:0030170Molecular Functionpyridoxal phosphate binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms12.460
SRR2545915Juvenile tuber13.440
SRP108465SRR5643513five period of Gastrodia elata5.080
SRR5643514five period of Gastrodia elata6.090
SRR5643515five period of Gastrodia elata7.830
SRR5643524five period of Gastrodia elata6.480
SRR5643525five period of Gastrodia elata11.430
SRR5643528five period of Gastrodia elata7.650
SRR5643658five period of Gastrodia elata4.920
SRR5643659five period of Gastrodia elata5.570
SRR5643660five period of Gastrodia elata3.950
SRR5643661five period of Gastrodia elata4.760
SRR5643662five period of Gastrodia elata6.760
SRR5643663five period of Gastrodia elata7.360
SRR5643664five period of Gastrodia elata4.730
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_115.740
SRR6049655Rhizomagastrodiae_C368-T10_good_18.810
SRR6049656Rhizomagastrodiae_C368-T07_good_117.700
SRR6049657Rhizomagastrodiae_C368-T07_good_19.280
SRR6049658Rhizomagastrodiae_C368-T04_good_123.010
SRR6049659Rhizomagastrodiae_C368-T04_good_115.110
SRR6049660Rhizomagastrodiae_C368-T01_good_117.100
SRR6049661Rhizomagastrodiae_C368-T04_good_118.280
SRR6049662Rhizomagastrodiae_C368-T01_good_141.400
SRR6049663Rhizomagastrodiae_C368-T01_good_134.650
SRR6049664Rhizomagastrodiae_C368-T10_good_124.520
SRR6049665Rhizomagastrodiae_C368-T10_good_124.520
SRP279888GastroGastrodia elata tuber 10.84
JuvenJuvenile tuber8.24
Mother_GastroMother tuber of Gastrodia elata 13.17
Mother_JuvenMother tuber of Juvenile 10.62