Detail information of GWHGAAEX012369/evm.TU.scaffold_42.197
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| nr | gi|695042477|ref|XP_009408894.1| | 6.50E-165 | PREDICTED: peroxidase P7-like [Musa acuminata subsp. malaccensis] |
| Swissprot | tr|Q9FLC0|PER52_ARATH | 1.00E-138 | Peroxidase 52 (Precursor) |
| trEMBL | tr|F6H521|F6H521_VITVI | 2.00E-159 | Putative uncharacterized protein {ECO:0000313|EMBL:CCB47390.1} |
| TAIR | AT5G05340 | 5.00E-138 | Peroxidase superfamily protein |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000050 | 5337737 | 5339552 | + |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX012369
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|---|
| Module2 |
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00141.22 | peroxidase | 40 | 280 | 5.70E-80 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| K00430 | E1.11.1.7 | Metabolic pathways | map01100 |
| Biosynthesis of secondary metabolites | map01110 | ||
| Phenylpropanoid biosynthesis | map00940 |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0055114 | Biological Process | oxidation-reduction process |
| GO:0042744 | Biological Process | hydrogen peroxide catabolic process |
| GO:0006979 | Biological Process | response to oxidative stress |
| GO:0004601 | Molecular Function | peroxidase activity |
| GO:0020037 | Molecular Function | heme binding |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 31.270 |
| SRR2545915 | Juvenile tuber | 53.300 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 880.220 |
| SRR5643514 | five period of Gastrodia elata | 430.920 | |
| SRR5643515 | five period of Gastrodia elata | 584.520 | |
| SRR5643524 | five period of Gastrodia elata | 689.670 | |
| SRR5643525 | five period of Gastrodia elata | 46.960 | |
| SRR5643528 | five period of Gastrodia elata | 26.080 | |
| SRR5643658 | five period of Gastrodia elata | 12.400 | |
| SRR5643659 | five period of Gastrodia elata | 715.510 | |
| SRR5643660 | five period of Gastrodia elata | 610.290 | |
| SRR5643661 | five period of Gastrodia elata | 660.090 | |
| SRR5643662 | five period of Gastrodia elata | 225.170 | |
| SRR5643663 | five period of Gastrodia elata | 390.690 | |
| SRR5643664 | five period of Gastrodia elata | 241.910 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 124.820 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 339.330 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 312.420 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 82.940 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 82.090 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 56.840 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 245.390 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 77.920 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 534.340 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 470.500 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 662.770 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 662.770 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 77.96 |
| Juven | Juvenile tuber | 40.40 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 23.07 | |
| Mother_Juven | Mother tuber of Juvenile | 15.09 |