Detail information of GWHGAAEX012370/evm.TU.scaffold_42.200
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| nr | gi|743770417|ref|XP_010915492.1| | 4.74E-162 | PREDICTED: peroxidase P7-like [Elaeis guineensis] |
| Swissprot | tr|A7NY33|PER4_VITVI | 8.00E-135 | Peroxidase 4 {ECO:0000250|UniProtKB:Q42578} (Precursor) |
| trEMBL | tr|I1KEL7|I1KEL7_SOYBN | 8.00E-159 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA06G42850.1} |
| TAIR | AT5G05340 | 2.00E-130 | Peroxidase superfamily protein |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000050 | 5348536 | 5350060 | + |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX012370
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|---|
| Module2 |
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00141.22 | peroxidase | 46 | 285 | 2.80E-77 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| K00430 | E1.11.1.7 | Metabolic pathways | map01100 |
| Biosynthesis of secondary metabolites | map01110 | ||
| Phenylpropanoid biosynthesis | map00940 |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0006979 | Biological Process | response to oxidative stress |
| GO:0042744 | Biological Process | hydrogen peroxide catabolic process |
| GO:0055114 | Biological Process | oxidation-reduction process |
| GO:0020037 | Molecular Function | heme binding |
| GO:0004601 | Molecular Function | peroxidase activity |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 38.820 |
| SRR2545915 | Juvenile tuber | 85.530 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 567.700 |
| SRR5643514 | five period of Gastrodia elata | 159.410 | |
| SRR5643515 | five period of Gastrodia elata | 1007.190 | |
| SRR5643524 | five period of Gastrodia elata | 466.040 | |
| SRR5643525 | five period of Gastrodia elata | 65.170 | |
| SRR5643528 | five period of Gastrodia elata | 201.760 | |
| SRR5643658 | five period of Gastrodia elata | 41.060 | |
| SRR5643659 | five period of Gastrodia elata | 232.600 | |
| SRR5643660 | five period of Gastrodia elata | 79.890 | |
| SRR5643661 | five period of Gastrodia elata | 145.760 | |
| SRR5643662 | five period of Gastrodia elata | 169.250 | |
| SRR5643663 | five period of Gastrodia elata | 107.670 | |
| SRR5643664 | five period of Gastrodia elata | 105.620 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 287.840 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 224.830 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 239.000 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 255.050 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 165.800 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 161.460 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 455.810 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 273.290 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 224.760 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 253.910 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 235.020 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 235.020 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 99.45 |
| Juven | Juvenile tuber | 6.48 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 89.24 | |
| Mother_Juven | Mother tuber of Juvenile | 52.43 |