Detail information of GWHGAAEX012376/evm.TU.scaffold_42.207


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|557694902|ref|YP_008797956.1|1.00E-20ubiquitin-conjugating enzyme E2-like protein [Candidatus Caldiarchaeum subterraneum]
KOGKOG04171.00E-108Ubiquitin-protein ligase
nrgi|694995384|ref|XP_009388323.1|5.83E-108PREDICTED: ubiquitin-conjugating enzyme E2 36-like [Musa acuminata subsp. malaccensis]
Swissprottr|Q9FZ48|UBC36_ARATH4.00E-109Ubiquitin-conjugating enzyme E2 36
trEMBLtr|M0RX37|M0RX37_MUSAM2.00E-108Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr1P04790_001}
TAIRAT1G168901.00E-108ubiquitin-conjugating enzyme 36

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000005055020125529095+
Transcript Sequence

Network for GWHGAAEX012376

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00179.25UQ_con91456.90E-49
Protein Sequence

Gene family

Gene familysubfamily
Ubiquitin FamilyUBC

KEGG pathway

KO Enzyme pathway mapID
K10580UBE2N, BLU, UBC13 Ubiquitin mediated proteolysis map04120
Toll and Imd signaling pathwaymap04624

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms135.920
SRR2545915Juvenile tuber200.970
SRP108465SRR5643513five period of Gastrodia elata191.020
SRR5643514five period of Gastrodia elata240.290
SRR5643515five period of Gastrodia elata206.250
SRR5643524five period of Gastrodia elata231.080
SRR5643525five period of Gastrodia elata259.550
SRR5643528five period of Gastrodia elata249.000
SRR5643658five period of Gastrodia elata257.730
SRR5643659five period of Gastrodia elata158.860
SRR5643660five period of Gastrodia elata150.420
SRR5643661five period of Gastrodia elata162.860
SRR5643662five period of Gastrodia elata154.620
SRR5643663five period of Gastrodia elata160.910
SRR5643664five period of Gastrodia elata157.530
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1184.020
SRR6049655Rhizomagastrodiae_C368-T10_good_1267.050
SRR6049656Rhizomagastrodiae_C368-T07_good_1211.500
SRR6049657Rhizomagastrodiae_C368-T07_good_1166.060
SRR6049658Rhizomagastrodiae_C368-T04_good_1183.460
SRR6049659Rhizomagastrodiae_C368-T04_good_1182.820
SRR6049660Rhizomagastrodiae_C368-T01_good_1174.820
SRR6049661Rhizomagastrodiae_C368-T04_good_1188.460
SRR6049662Rhizomagastrodiae_C368-T01_good_1202.980
SRR6049663Rhizomagastrodiae_C368-T01_good_1198.110
SRR6049664Rhizomagastrodiae_C368-T10_good_1262.260
SRR6049665Rhizomagastrodiae_C368-T10_good_1262.260
SRP279888GastroGastrodia elata tuber 154.61
JuvenJuvenile tuber211.01
Mother_GastroMother tuber of Gastrodia elata 149.66
Mother_JuvenMother tuber of Juvenile 161.30