Detail information of GWHGAAEX012392/evm.TU.scaffold_42.230


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|743770679|ref|XP_010915633.1|5.55E-133PREDICTED: NAC domain-containing protein 76-like [Elaeis guineensis]
Swissprottr|Q9MA17|SMB_ARATH1.00E-109Protein SOMBRERO
trEMBLtr|B9S679|B9S679_RICCO7.00E-130NAC domain-containing protein, putative {ECO:0000313|EMBL:EEF40887.1}
TAIRAT1G795805.00E-109NAC (No Apical Meristem) domain transcriptional regulator superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000005059090245925686+
Transcript Sequence

Network for GWHGAAEX012392

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02365.14NAM111391.80E-34
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyNAC

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms1.050
SRR2545915Juvenile tuber8.460
SRP108465SRR5643513five period of Gastrodia elata1.950
SRR5643514five period of Gastrodia elata1.290
SRR5643515five period of Gastrodia elata1.020
SRR5643524five period of Gastrodia elata2.620
SRR5643525five period of Gastrodia elata1.610
SRR5643528five period of Gastrodia elata0.170
SRR5643658five period of Gastrodia elata0.440
SRR5643659five period of Gastrodia elata0.140
SRR5643660five period of Gastrodia elata0.410
SRR5643661five period of Gastrodia elata0.310
SRR5643662five period of Gastrodia elata0.360
SRR5643663five period of Gastrodia elata0.160
SRR5643664five period of Gastrodia elata0.190
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_12.180
SRR6049655Rhizomagastrodiae_C368-T10_good_13.540
SRR6049656Rhizomagastrodiae_C368-T07_good_12.050
SRR6049657Rhizomagastrodiae_C368-T07_good_12.140
SRR6049658Rhizomagastrodiae_C368-T04_good_11.160
SRR6049659Rhizomagastrodiae_C368-T04_good_10.800
SRR6049660Rhizomagastrodiae_C368-T01_good_10.800
SRR6049661Rhizomagastrodiae_C368-T04_good_12.640
SRR6049662Rhizomagastrodiae_C368-T01_good_12.290
SRR6049663Rhizomagastrodiae_C368-T01_good_11.070
SRR6049664Rhizomagastrodiae_C368-T10_good_11.250
SRR6049665Rhizomagastrodiae_C368-T10_good_11.250
SRP279888GastroGastrodia elata tuber 0.25
JuvenJuvenile tuber0.14
Mother_GastroMother tuber of Gastrodia elata 28.44
Mother_JuvenMother tuber of Juvenile 6.91