Detail information of GWHGAAEX012394/evm.TU.scaffold_427.3
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|310817801|ref|YP_003950159.1| | 3.00E-13 | urease [Stigmatella aurantiaca DW4/3-1] |
| nr | gi|743814670|ref|XP_010930125.1| | 2.24E-16 | PREDICTED: urease isoform X3 [Elaeis guineensis] |
| Swissprot | tr|B9GCH9|UREA_ORYSJ | 2.00E-18 | Urease |
| trEMBL | tr|A0A096TX71|A0A096TX71_MAIZE | 2.00E-16 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GRMZM2G461569_P04} |
| TAIR | AT1G67550 | 3.00E-17 | urease |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000419 | 36849 | 49129 | + |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX012394
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|---|
| Module1 |
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00547.17 | Urease_gamma | 1 | 42 | 8.60E-15 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| K01427 | URE | Metabolic pathways | map01100 |
| Microbial metabolism in diverse environments | map01120 | ||
| Purine metabolism | map00230 | ||
| Arginine biosynthesis | map00220 | ||
| Atrazine degradation | map00791 |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0043419 | Biological Process | urea catabolic process |
| GO:0016151 | Molecular Function | nickel cation binding |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 0.000 |
| SRR2545915 | Juvenile tuber | 0.000 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 61.660 |
| SRR5643514 | five period of Gastrodia elata | 0.000 | |
| SRR5643515 | five period of Gastrodia elata | 0.000 | |
| SRR5643524 | five period of Gastrodia elata | 0.000 | |
| SRR5643525 | five period of Gastrodia elata | 730.340 | |
| SRR5643528 | five period of Gastrodia elata | 165.180 | |
| SRR5643658 | five period of Gastrodia elata | 220.150 | |
| SRR5643659 | five period of Gastrodia elata | 0.000 | |
| SRR5643660 | five period of Gastrodia elata | 0.000 | |
| SRR5643661 | five period of Gastrodia elata | 0.000 | |
| SRR5643662 | five period of Gastrodia elata | 0.000 | |
| SRR5643663 | five period of Gastrodia elata | 0.000 | |
| SRR5643664 | five period of Gastrodia elata | 70.100 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 0.000 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 0.000 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 0.000 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 0.000 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 0.000 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 0.000 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 0.000 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 0.000 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 0.000 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 0.000 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 0.000 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 0.000 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 0.00 |
| Juven | Juvenile tuber | 117.69 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 0.00 | |
| Mother_Juven | Mother tuber of Juvenile | 323.41 |