Detail information of GWHGAAEX012399/evm.TU.scaffold_43.7
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| nr | gi|223931156|gb|ACN25040.1| | 0 | peroxidase [Doritis pulcherrima x Phalaenopsis hybrid cultivar] |
| Swissprot | tr|Q96520|PER12_ARATH | 2.00E-152 | Peroxidase 12 (Precursor) |
| trEMBL | tr|E4W4Z9|E4W4Z9_9ASPA | 0 | Peroxidase {ECO:0000313|EMBL:ACN25040.1} |
| TAIR | AT1G71695 | 8.00E-152 | Peroxidase superfamily protein |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000039 | 358392 | 362132 | - |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX012399
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|---|
| Module2 |
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00141.22 | peroxidase | 51 | 292 | 2.60E-68 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| K00430 | E1.11.1.7 | Metabolic pathways | map01100 |
| Biosynthesis of secondary metabolites | map01110 | ||
| Phenylpropanoid biosynthesis | map00940 |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0055114 | Biological Process | oxidation-reduction process |
| GO:0006979 | Biological Process | response to oxidative stress |
| GO:0042744 | Biological Process | hydrogen peroxide catabolic process |
| GO:0004601 | Molecular Function | peroxidase activity |
| GO:0020037 | Molecular Function | heme binding |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 1.600 |
| SRR2545915 | Juvenile tuber | 22.750 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 68.590 |
| SRR5643514 | five period of Gastrodia elata | 56.080 | |
| SRR5643515 | five period of Gastrodia elata | 93.190 | |
| SRR5643524 | five period of Gastrodia elata | 70.820 | |
| SRR5643525 | five period of Gastrodia elata | 2.500 | |
| SRR5643528 | five period of Gastrodia elata | 7.080 | |
| SRR5643658 | five period of Gastrodia elata | 11.120 | |
| SRR5643659 | five period of Gastrodia elata | 16.040 | |
| SRR5643660 | five period of Gastrodia elata | 4.290 | |
| SRR5643661 | five period of Gastrodia elata | 6.090 | |
| SRR5643662 | five period of Gastrodia elata | 2.670 | |
| SRR5643663 | five period of Gastrodia elata | 11.500 | |
| SRR5643664 | five period of Gastrodia elata | 2.840 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 214.410 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 47.930 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 123.130 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 148.820 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 91.420 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 66.200 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 83.820 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 69.840 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 240.100 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 186.610 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 107.350 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 107.350 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 31.62 |
| Juven | Juvenile tuber | 3.82 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 5.26 | |
| Mother_Juven | Mother tuber of Juvenile | 1.68 |