Detail information of GWHGAAEX012405/evm.TU.scaffold_43.17


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|347756711|ref|YP_004864274.1|3.00E-26protein kinase domain-containing protein [Candidatus Chloracidobacterium thermophilum B]
KOGKOG11874.00E-96Serine/threonine protein kinase
nrgi|695064099|ref|XP_009420583.1|2.10E-119PREDICTED: leucine-rich repeat receptor protein kinase EXS [Musa acuminata subsp. malaccensis]
Swissprottr|Q9LYN8|EXS_ARATH1.00E-75Leucine-rich repeat receptor protein kinase EXS (Precursor)
trEMBLtr|M0RGT3|M0RGT3_MUSAM2.00E-108Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr10P09570_001}
TAIRAT5G424404.00E-96Protein kinase superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000039571186572271+
Transcript Sequence

Network for GWHGAAEX012405

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module3

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00069.24Pkinase793559.40E-42
Protein Sequence

Gene family

Gene familysubfamily
Protein Kinases FamilyRLK-Pelle_LRR-Xb-1

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006468Biological Processprotein phosphorylation
GO:0005524Molecular FunctionATP binding
GO:0004672Molecular Functionprotein kinase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms14.480
SRR2545915Juvenile tuber13.180
SRP108465SRR5643513five period of Gastrodia elata32.030
SRR5643514five period of Gastrodia elata31.510
SRR5643515five period of Gastrodia elata38.150
SRR5643524five period of Gastrodia elata31.160
SRR5643525five period of Gastrodia elata43.630
SRR5643528five period of Gastrodia elata42.370
SRR5643658five period of Gastrodia elata41.790
SRR5643659five period of Gastrodia elata93.550
SRR5643660five period of Gastrodia elata73.280
SRR5643661five period of Gastrodia elata106.100
SRR5643662five period of Gastrodia elata102.000
SRR5643663five period of Gastrodia elata92.860
SRR5643664five period of Gastrodia elata169.000
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_152.630
SRR6049655Rhizomagastrodiae_C368-T10_good_135.150
SRR6049656Rhizomagastrodiae_C368-T07_good_139.580
SRR6049657Rhizomagastrodiae_C368-T07_good_145.480
SRR6049658Rhizomagastrodiae_C368-T04_good_146.180
SRR6049659Rhizomagastrodiae_C368-T04_good_146.520
SRR6049660Rhizomagastrodiae_C368-T01_good_158.250
SRR6049661Rhizomagastrodiae_C368-T04_good_143.430
SRR6049662Rhizomagastrodiae_C368-T01_good_133.410
SRR6049663Rhizomagastrodiae_C368-T01_good_153.570
SRR6049664Rhizomagastrodiae_C368-T10_good_134.700
SRR6049665Rhizomagastrodiae_C368-T10_good_134.700
SRP279888GastroGastrodia elata tuber 40.87
JuvenJuvenile tuber26.82
Mother_GastroMother tuber of Gastrodia elata 52.28
Mother_JuvenMother tuber of Juvenile 24.83