Detail information of GWHGAAEX012409/evm.TU.scaffold_43.23
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|255038656|ref|YP_003089277.1| | 2.00E-119 | nicotinate phosphoribosyltransferase [Dyadobacter fermentans DSM 18053] |
| KOG | KOG2511 | 0 | Nicotinic acid phosphoribosyltransferase |
| nr | gi|695006054|ref|XP_009389501.1| | 0 | PREDICTED: nicotinate phosphoribosyltransferase-like [Musa acuminata subsp. malaccensis] |
| trEMBL | tr|M0S663|M0S663_MUSAM | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr2P08220_001} |
| TAIR | AT2G23420 | 0 | nicotinate phosphoribosyltransferase 2 |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000039 | 752115 | 786064 | + |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX012409
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| K00763 | pncB, NAPRT1 | Metabolic pathways | map01100 |
| Nicotinate and nicotinamide metabolism | map00760 |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0009435 | Biological Process | NAD biosynthetic process |
| GO:0004514 | Molecular Function | nicotinate-nucleotide diphosphorylase (carboxylating) activity |
| GO:0004516 | Molecular Function | nicotinate phosphoribosyltransferase activity |
| GO:0003824 | Molecular Function | catalytic activity |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 24.470 |
| SRR2545915 | Juvenile tuber | 36.870 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 32.650 |
| SRR5643514 | five period of Gastrodia elata | 31.590 | |
| SRR5643515 | five period of Gastrodia elata | 36.380 | |
| SRR5643524 | five period of Gastrodia elata | 31.820 | |
| SRR5643525 | five period of Gastrodia elata | 31.110 | |
| SRR5643528 | five period of Gastrodia elata | 73.240 | |
| SRR5643658 | five period of Gastrodia elata | 24.770 | |
| SRR5643659 | five period of Gastrodia elata | 38.170 | |
| SRR5643660 | five period of Gastrodia elata | 42.950 | |
| SRR5643661 | five period of Gastrodia elata | 46.730 | |
| SRR5643662 | five period of Gastrodia elata | 45.690 | |
| SRR5643663 | five period of Gastrodia elata | 33.570 | |
| SRR5643664 | five period of Gastrodia elata | 28.550 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 27.180 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 26.150 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 30.060 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 20.310 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 24.370 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 19.150 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 22.470 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 20.830 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 29.470 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 22.930 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 30.670 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 30.670 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 38.22 |
| Juven | Juvenile tuber | 26.95 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 23.09 | |
| Mother_Juven | Mother tuber of Juvenile | 20.26 |