Gene detail

Detail information of GWHGAAEX012413/evm.TU.scaffold_43.28

Functional Annotation

Database	Orthologs	E value	Annotation
nr	gi\|743764554\|ref\|XP_010912481.1\|	0	PREDICTED: filament-like plant protein 3 [Elaeis guineensis]
Swissprot	tr\|Q9MA92\|FPP3_ARATH	1.00E-92	Filament-like plant protein 3
trEMBL	tr\|M0RVK9\|M0RVK9_MUSAM	2.00E-146	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr11P26290_001}
TAIR	AT3G05270	1.00E-83	Plant protein of unknown function (DUF869)

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000039	1051311	1086012	-

Transcript Sequence
>GWHTAAEX012413 GTGAAAGTGAACTACAGGGCGGGGTGTTTTGGTCTGAATGCGCTGATGATTGGCATCAATGGCAGCAATCACAAGGGGTTGAAAAACCAAAAAGCGAAGAGGAAATAAGACCGATCCCGATTTCATTAGAAGAAGTTATTATTATCGCTTCAACCGAAGCGAAGGTTGCAGTTTGAACAGAGAGAGCTATAACCAAAATAGCGACTTTCCTCTTTCTACTCACATGCTTCTGCACTGGGTGCAGCGCTGGCGGCCATCTTCATCCATTCGCCATTAACTTGTATTTGAATTTTTGTCTTCTGGCAATCTTCAAAGGGATATTCAGCTCGGATGCAAGATTTCAGAATTTGGAAGCAAGGCAATGATGCGATCTTAAGATTTCAGATATGGATCAACGGAGCAGGATGTGGAGTAGAGATCTCTCGGAGAAGAACTTGGGTGAATCGGAGAGCTCCGGATCAATCTCGTCTTATTCCGAGAGATATTCGGATGAGCAGGAGGTATTTGGCTCTTCTCCTACTGAAATCTCCATAAATCATACTCACTCACCAAAAGTTTCATCAATTAATGAGGATAATGAAGAACATGGAAATGTCAAAATTTTAACTGAAAGGCTTTCAGCTGCTCTTTTGGATGTTGCTGCAAAAGAAGATCTGATAAAGCAACACGCAAAAGTTACAGAAGAAGCGATTTCAGGATGGGAAACAGCAGAAGGTGAACTCGGAACTTTGAAGCAGCAGCTTGAAACTTGTTCTTTGAAGAATTCTGTTCTCGAGGATAGAATCAACCACCTTGACGAAGCTCTTAAAGAATGTGTTAGGCAGCTGAGGCAATCAAGAGAGGAACAAGAGGAGAAAGCTCAGGAAGCCCTCTTCAAAACTAACGAGTTGGAATCTAAAAAGGTAGATCTTGAAAAACAAATCAAGGTGGTTTGTGCCCAACTTGAAACAGCTATAGCTGAGGCATCTACTGCTGATAAGTCCATTGGCACAAGGCTAGAATTTCTAGAAAAAGAAAACTTATATTTAAAAACCGAGCTACTTGCTCAATCTGAACAGCTACGTATATGTGCATTGGAGCGAGAACTGAGCACCCAGGCAGCTGAATCAGCTAGTAAGCAGCATTTGGAAAGCATCAAAAAGCTGGCAAAGCTTGATTCGGAGTGTCGAAGGTTACAAGCTGCAGCGTGCAGAACAACATCAACAAGATGCCAAAGGACTGTCTCTGGCACGGTCACTACGGAATACCTTGCAGAGAGCCATTCAGAGGACAATACGCTTGCACTCAGTGCGTGTAATGGCAAAGAAAAATTGAATTCATGGGCATCAGTGTTTATTGCACAGCTCGACCAATTCAAGCAAGAGAAGGCATGCACAAGCTATGCAACTGCATCAACTGAGATTGATTTAATGGATGATTTTCTTGAGATGGAGAGACTAGCTGCAACCCCTGAAACTGATCATGAAGTCTTCTCCAAAAACATCGATAATGATTTGAATGGAGATTTTTCAAGCAATAAGTCACCGAGCAGTGAGCTCGAAACTCTACAGCAACATGTCGCTGATTTGGAAAAGAAGGTCAAAGAGATAGAAAACGATAAATGTCATCTTAAAATGGCTTTAACTGAGACTCAAACTCAGCTTGAGGCTTCATGCAGCAAGCTTGCTTCTGCCAGTGATAAGTTGGTCAATATGCAGACTAAGCTGAGTTTGGCTATTGAATCAAAGGAAGATGCCATGGCTGAAACGCTTGCCCTGGAATTGGAAAGGAAAGAATTGGAGTCTCAGATAGAGACTGCTCGTTGGGAAGTTGCGTCGCTTTGCGAGCAGGTGGAGTTGTTGCAAGGAAAACTTGATGATAAAACATTATCAATTGAGCTTGAGGAAAATATAGAGAACTTAGAAGCAACAAGTAAGCAGCTGCAGTCTCAGCTAAATTCAGCAAATGGGCAGGCTGAAGGGCTGCGTGAGCACGTGAGGTTCTTGGAAGCAAAGTTAGAAGAAGAAAGAGCCCTATCTATTGTGTATTTGACTAAGGCAGAAGTGAATGAAGCGATGTGGAAAAAGCTAGAGATTCAACTCATCTCAGCAAACTCGGATCTTGAAAATTATAACAAATCTGTTGCTGCATTGGAGCTCGAACTAAAAGATAAAAAGTCGATATCTATCAAGCTAGCCGACAGAGCAGAAGCCGCAGAATCTGCAAGAAGTTCCTTAGAATCCCAGCTTGAGTTGACTCATGCAGAACTGGGAAGACTTCGTAATGAAGTTCGTCATCTACTGGAGGAAATCAAGAAGGAGAGGGCACTGTCGACTGAGTATTCTGCAAAATGTCAGGCTCTGGAGGAAGAGCTATCGAAGAGGAAAAAAGAAGTCGAGCTAGGGCGAACTACAAGCTCTATTGTAGTTGCAAATTTGAATAAGGAGAAAGAGCTTGCCGAGGCTGCCGGGAAGCTCGCAGAGTGCCAGAAGACCATTGCTTCGCTCGGTCAGCAACTGAAATGCTTAACTAACATTGACAAGCTGATGTTTGAGGCCAAGAAACCAGAGAAAGAAGGATGCTTGCCGGCATATCTCTTCTTTCCGGAAAACGACAGAGCACTTCACTCTCATTGTTCTCCAGAAGATGCTGATTTTCCCACCCTTTCTAGTGGCAGTCATGAGTGGGGTGCTCCTGCCTCATCTTCCTCAGCCTCATCTCTTTCCGGGCTTGTAAGATTACTCTCTGAGTAGAAGCAGTGATAGTCTAGGGAACCTGCTCTGGGTTTATTTAGAGAAAAAACAGGTTCTTATCTTTTTGTTCTGCCTATGAATATGAATGGGTGGTCCTATTTGATTTTTTCTTCAGCATATCTCGAGTGGTGGTAGGGTATTGGTTCTTACGGTGATTGTAAATTGTACATTCCTTCTGCGCTATGGACTGTGTTTGGAAATGAAATGGGATGTAAATTGAGCTTCCATGGAAACTATCCTGATTAGTGCTGGATTTAATTCGAGTTTGGTCGAGTCAGC

Network for GWHGAAEX012413

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF05911.10	FPP	87	201	2.00E-28
PF05911.10	FPP	190	264	2.00E-14
PF05911.10	FPP	310	373	2.90E-12
PF05911.10	FPP	550	708	1.20E-15

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	47.800
SRP064423	SRR2545915	Juvenile tuber	42.510
SRP108465	SRR5643513	five period of Gastrodia elata	24.500
	SRR5643514	five period of Gastrodia elata	27.990
	SRR5643515	five period of Gastrodia elata	24.380
	SRR5643524	five period of Gastrodia elata	23.520
	SRR5643525	five period of Gastrodia elata	35.390
	SRR5643528	five period of Gastrodia elata	36.030
	SRR5643658	five period of Gastrodia elata	37.050
	SRR5643659	five period of Gastrodia elata	25.520
	SRR5643660	five period of Gastrodia elata	26.770
	SRR5643661	five period of Gastrodia elata	27.520
	SRR5643662	five period of Gastrodia elata	28.570
	SRR5643663	five period of Gastrodia elata	28.480
	SRR5643664	five period of Gastrodia elata	29.480
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	26.040
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	21.170
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	28.120
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	24.060
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	26.700
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	25.290
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	27.350
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	25.320
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	26.220
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	28.090
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	26.490
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	26.490
SRP279888	Gastro	Gastrodia elata tuber	40.84
	Juven	Juvenile tuber	38.20
	Mother_Gastro	Mother tuber of Gastrodia elata	27.60
	Mother_Juven	Mother tuber of Juvenile	23.34