Gene detail

Detail information of GWHGAAEX012433/evm.TU.scaffold_43.61

Functional Annotation

Database	Orthologs	E value	Annotation
KOG	KOG2488	2.00E-41	Acetyltransferase (GNAT) domain-containing protein
nr	gi\|672173027\|ref\|XP_008806628.1\|	9.29E-126	PREDICTED: N-alpha-acetyltransferase 40 [Phoenix dactylifera]
trEMBL	tr\|M0U0N7\|M0U0N7_MUSAM	1.00E-119	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr9P15800_001}
TAIR	AT1G18340_2	2.00E-41	Unannotated protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000039	2273214	2299204	+

Transcript Sequence
>GWHTAAEX012433 ATTGCCAAACAGCACAAAACTTCTCTAAAATTGCTTCAAGCTCCCAGGCCTTACATTTATACAGAAACAAAATTATAAAGACAAAAACAAAATTTTCCTCCTATTTTCTTTATTTTCTTATAACCAATGTTTTATTTCGGACGATCAGCCCGTTGTCTAGTTCACAGCCAACTACGCAGAGCACTGCGCGACAGTTGCAAAACGTGCTGTAAGAGATTCCTTCTGAAAGAGTGAAGATGCTGTGTGAGTGAAGTGCGGGGCTTTCATCGTTGATCATTATTCTTCTTTGAGGAATTCGGGCGTGAAAATGGATTCTAATAAGATTCATAGTAGTAAAAAAGAAAAGAAGTTAAAACGGAAGGAGGTATTGGTGAAGAAAAAAGCAATTGAAGAGATAATCAAATCAGCATCTACAGTAACGGATCATCTAGCTTCCTTTCTAGCTTTGTCTCAATATGCTAGGAATGGTTTATCTGTCTACTTCAAGTCAGGATTTGGAGATCAACTATCATCTTCTATAAAGAAATACATTCAGGATCTTCTTAAGGCCAATATGGAAGGTCCTTATGGCCCTGAATGGCCAATAGTGGAGAAGGTGAAGCGTAGGGAAATGGTTGCTCCAGAAGCACGATACATATTTGTTTGGAAATTTTCAATTATGGTTCATGATGATATATATCCTAAAGAAGATGGTCAAATGAACTCCTGGACTGGCGGTGGTGACCCTTTGCTTGGCTTTGTGCAATATCGTTTTATTGTTGAAGAAGATATACCTGTTGTTTATGTCTATGAACTTCAACTGGAAATTTGTGCTAGGGGAAAGGGGTTGGGAAAGTTCCTAATGCAGCTCATTGAGCTCATTGCTCGTAAGAATCAGATGGGAGCTGTGATGTTAACCGTACAAAAAGCTAATATATTGGCATTAAATTTTTATACAAATAAACTGAGATATGTTATTTCAGCAATTTCTCCCTCAAAAGCCGATCCATTGACAGGATCTGAAAAGAGCTATGAGATTCTATGCAAAACTTTTAATAGCGAGGCAAAAGTCAAACTTGAGGAATCCAACTCTTTTAATGATGCCTGAAGTTTACTTTGACTTGACATTTTCCTGAGCCGTTATTGCTTGGGCGCAAGCGCCCTCACCTGGGCGTGCTTTAGTACCTTGCTTACAACTCTGATGTGCTTGGGCGAACGTCTCACACGTGCCTGGACAGTTATACAGAAAAAGGGCAGGCTGGATCCAACAAATCTTTGCCTCTTACATGTCTCTAATTTATCTTTGGGCAATCGTTTGGTCAAACATAGCTACCCTTTATTGCAAGTGCGAACTTTGTTTAGCTCTGTAGTAGCTTTCAGCTTAGTTTGTCCTTGATCCTATTGTGCCTGACCTCAATATGCTTTGATATGGAGTGAAATGTGGCAATCTTCAGTAAGTGCATAATAATTTGTCTATCATTATAATTTATAACAATACTTTTGTATTAAATTCCTTACATGTATGGAATAATTTTTGGTGGGGCCTTAACGCAA

Network for GWHGAAEX012433

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00583.24	Acetyltransf_1	116	210	5.70E-07

Protein Sequence

Gene family

Gene family	subfamily
Transcription Factors Family	GNAT

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0008080	Molecular Function	N-acetyltransferase activity

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	14.180
SRP064423	SRR2545915	Juvenile tuber	11.950
SRP108465	SRR5643513	five period of Gastrodia elata	7.530
	SRR5643514	five period of Gastrodia elata	10.540
	SRR5643515	five period of Gastrodia elata	7.720
	SRR5643524	five period of Gastrodia elata	10.320
	SRR5643525	five period of Gastrodia elata	9.560
	SRR5643528	five period of Gastrodia elata	8.570
	SRR5643658	five period of Gastrodia elata	9.050
	SRR5643659	five period of Gastrodia elata	7.910
	SRR5643660	five period of Gastrodia elata	7.900
	SRR5643661	five period of Gastrodia elata	6.490
	SRR5643662	five period of Gastrodia elata	6.130
	SRR5643663	five period of Gastrodia elata	7.760
	SRR5643664	five period of Gastrodia elata	5.870
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	4.870
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	3.070
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	5.060
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	5.390
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	4.250
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	5.760
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	5.610
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	5.660
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	6.900
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	6.840
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	6.140
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	6.140
SRP279888	Gastro	Gastrodia elata tuber	5.62
	Juven	Juvenile tuber	8.11
	Mother_Gastro	Mother tuber of Gastrodia elata	5.80
	Mother_Juven	Mother tuber of Juvenile	7.87