Detail information of GWHGAAEX012467/evm.TU.scaffold_43.127


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG00488.00E-85Transcription factor, Myb superfamily
nrgi|586755736|ref|XP_006853158.1|2.96E-86hypothetical protein AMTR_s00038p00183620 [Amborella trichopoda]
Swissprottr|Q8GWP0|MYB39_ARATH1.00E-66Transcription factor MYB39
trEMBLtr|U5CXF7|U5CXF7_AMBTC1.00E-86Uncharacterized protein {ECO:0000313|EMBL:ERN14625.1}
TAIRAT5G102808.00E-85myb domain protein 92

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000003954087525410620+
Transcript Sequence

Network for GWHGAAEX012467

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module8

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00249.30Myb_DNA-binding15627.20E-17
PF00249.30Myb_DNA-binding681131.10E-14
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyMYB

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0003677Molecular FunctionDNA binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms69.220
SRR2545915Juvenile tuber82.160
SRP108465SRR5643513five period of Gastrodia elata17.010
SRR5643514five period of Gastrodia elata8.500
SRR5643515five period of Gastrodia elata10.150
SRR5643524five period of Gastrodia elata8.260
SRR5643525five period of Gastrodia elata1.050
SRR5643528five period of Gastrodia elata0.810
SRR5643658five period of Gastrodia elata0.740
SRR5643659five period of Gastrodia elata31.350
SRR5643660five period of Gastrodia elata23.030
SRR5643661five period of Gastrodia elata43.370
SRR5643662five period of Gastrodia elata15.660
SRR5643663five period of Gastrodia elata34.150
SRR5643664five period of Gastrodia elata14.720
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_15.360
SRR6049655Rhizomagastrodiae_C368-T10_good_18.150
SRR6049656Rhizomagastrodiae_C368-T07_good_16.470
SRR6049657Rhizomagastrodiae_C368-T07_good_14.820
SRR6049658Rhizomagastrodiae_C368-T04_good_11.520
SRR6049659Rhizomagastrodiae_C368-T04_good_10.990
SRR6049660Rhizomagastrodiae_C368-T01_good_12.390
SRR6049661Rhizomagastrodiae_C368-T04_good_12.700
SRR6049662Rhizomagastrodiae_C368-T01_good_11.100
SRR6049663Rhizomagastrodiae_C368-T01_good_11.210
SRR6049664Rhizomagastrodiae_C368-T10_good_12.820
SRR6049665Rhizomagastrodiae_C368-T10_good_12.820
SRP279888GastroGastrodia elata tuber 19.46
JuvenJuvenile tuber26.97
Mother_GastroMother tuber of Gastrodia elata 2.95
Mother_JuvenMother tuber of Juvenile 29.53