Detail information of GWHGAAEX012470/evm.TU.scaffold_43.131


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|427737601|ref|YP_007057145.1|3.00E-21small GTP-binding protein domain-containing protein [Rivularia sp. PCC 7116]
KOGKOG00941.00E-131GTPase Rab6/YPT6/Ryh1, small G protein superfamily
nrgi|743801169|ref|XP_010926288.1|1.63E-138PREDICTED: ras-related protein RABH1e [Elaeis guineensis]
Swissprottr|Q9LFT9|RAH1E_ARATH4.00E-132Ras-related protein RABH1e
trEMBLtr|M0SA61|M0SA61_MUSAM1.00E-137Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr2P22200_001}
TAIRAT5G102601.00E-131RAB GTPase homolog H1E

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000003955040725529911-
Transcript Sequence

Network for GWHGAAEX012470

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00071.21Ras111691.90E-56
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0003924Molecular FunctionGTPase activity
GO:0005525Molecular FunctionGTP binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms41.470
SRR2545915Juvenile tuber48.800
SRP108465SRR5643513five period of Gastrodia elata61.930
SRR5643514five period of Gastrodia elata69.880
SRR5643515five period of Gastrodia elata72.630
SRR5643524five period of Gastrodia elata72.940
SRR5643525five period of Gastrodia elata95.710
SRR5643528five period of Gastrodia elata97.270
SRR5643658five period of Gastrodia elata86.330
SRR5643659five period of Gastrodia elata53.240
SRR5643660five period of Gastrodia elata57.400
SRR5643661five period of Gastrodia elata57.620
SRR5643662five period of Gastrodia elata80.110
SRR5643663five period of Gastrodia elata74.150
SRR5643664five period of Gastrodia elata64.890
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_145.360
SRR6049655Rhizomagastrodiae_C368-T10_good_170.990
SRR6049656Rhizomagastrodiae_C368-T07_good_147.520
SRR6049657Rhizomagastrodiae_C368-T07_good_141.640
SRR6049658Rhizomagastrodiae_C368-T04_good_149.070
SRR6049659Rhizomagastrodiae_C368-T04_good_140.060
SRR6049660Rhizomagastrodiae_C368-T01_good_140.110
SRR6049661Rhizomagastrodiae_C368-T04_good_142.450
SRR6049662Rhizomagastrodiae_C368-T01_good_141.760
SRR6049663Rhizomagastrodiae_C368-T01_good_141.870
SRR6049664Rhizomagastrodiae_C368-T10_good_159.150
SRR6049665Rhizomagastrodiae_C368-T10_good_159.150
SRP279888GastroGastrodia elata tuber 79.40
JuvenJuvenile tuber125.84
Mother_GastroMother tuber of Gastrodia elata 127.35
Mother_JuvenMother tuber of Juvenile 129.26