Detail information of GWHGAAEX012476/evm.TU.scaffold_44.2
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|194334032|ref|YP_002015892.1| | 7.00E-112 | NmrA family protein [Prosthecochloris aestuarii DSM 271] |
| KOG | KOG1203 | 1.00E-148 | Predicted dehydrogenase |
| nr | gi|743784752|ref|XP_010921737.1| | 2.81E-160 | PREDICTED: divinyl chlorophyllide a 8-vinyl-reductase, chloroplastic [Elaeis guineensis] |
| Swissprot | tr|J9RYI6|DCVR_CUCSA | 2.00E-150 | Divinyl chlorophyllide a 8-vinyl-reductase, chloroplastic (Precursor) |
| trEMBL | tr|W9RYB8|W9RYB8_9ROSA | 2.00E-153 | Uncharacterized protein {ECO:0000313|EMBL:EXC03134.1} |
| TAIR | AT5G18660 | 1.00E-148 | NAD(P)-binding Rossmann-fold superfamily protein |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000045 | 130054 | 131622 | + |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX012476
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF13460.5 | NAD_binding_10 | 61 | 262 | 3.30E-15 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| K19073 | DVR | Metabolic pathways | map01100 |
| Biosynthesis of secondary metabolites | map01110 | ||
| Porphyrin and chlorophyll metabolism | map00860 |
Gene Ontology
| GO term | Ontology | Name |
|---|
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 5.470 |
| SRR2545915 | Juvenile tuber | 4.350 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 7.020 |
| SRR5643514 | five period of Gastrodia elata | 7.300 | |
| SRR5643515 | five period of Gastrodia elata | 6.200 | |
| SRR5643524 | five period of Gastrodia elata | 5.300 | |
| SRR5643525 | five period of Gastrodia elata | 12.210 | |
| SRR5643528 | five period of Gastrodia elata | 8.820 | |
| SRR5643658 | five period of Gastrodia elata | 9.320 | |
| SRR5643659 | five period of Gastrodia elata | 11.020 | |
| SRR5643660 | five period of Gastrodia elata | 11.760 | |
| SRR5643661 | five period of Gastrodia elata | 13.720 | |
| SRR5643662 | five period of Gastrodia elata | 16.010 | |
| SRR5643663 | five period of Gastrodia elata | 14.320 | |
| SRR5643664 | five period of Gastrodia elata | 16.590 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 6.700 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 4.990 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 8.240 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 7.540 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 6.920 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 5.550 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 5.270 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 5.970 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 5.210 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 4.510 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 6.570 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 6.570 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 17.30 |
| Juven | Juvenile tuber | 9.52 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 8.08 | |
| Mother_Juven | Mother tuber of Juvenile | 6.07 |