Detail information of GWHGAAEX012477/evm.TU.scaffold_44.3


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|264677094|ref|YP_003277000.1|7.00E-462OG-Fe(II) oxygenase [Comamonas testosteroni CNB-2]
KOGKOG15911.00E-144Prolyl 4-hydroxylase alpha subunit
nrgi|728820446|gb|KHG03768.1|1.04E-157Prolyl 4-hydroxylase subunit alpha-1 [Gossypium arboreum]
Swissprottr|Q8LAN3|P4H4_ARATH3.00E-145Probable prolyl 4-hydroxylase 4 (Precursor)
trEMBLtr|B9RSW4|B9RSW4_RICCO9.00E-156Prolyl 4-hydroxylase alpha subunit, putative {ECO:0000313|EMBL:EEF45447.1}
TAIRAT5G189001.00E-1442-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000045132344162367-
Transcript Sequence

Network for GWHGAAEX012477

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF13640.52OG-FeII_Oxy_31382561.60E-21
PF01549.23ShK2693100.00057
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K00472P4HA Metabolic pathways map01100
Arginine and proline metabolismmap00330

Gene Ontology

GO term OntologyName
GO:0055114Biological Processoxidation-reduction process
GO:0031418Molecular FunctionL-ascorbic acid binding
GO:0016705Molecular Functionoxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0005506Molecular Functioniron ion binding
GO:0016491Molecular Functionoxidoreductase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms184.040
SRR2545915Juvenile tuber179.120
SRP108465SRR5643513five period of Gastrodia elata166.370
SRR5643514five period of Gastrodia elata143.130
SRR5643515five period of Gastrodia elata147.820
SRR5643524five period of Gastrodia elata170.110
SRR5643525five period of Gastrodia elata124.370
SRR5643528five period of Gastrodia elata132.530
SRR5643658five period of Gastrodia elata160.880
SRR5643659five period of Gastrodia elata137.350
SRR5643660five period of Gastrodia elata121.490
SRR5643661five period of Gastrodia elata143.530
SRR5643662five period of Gastrodia elata115.210
SRR5643663five period of Gastrodia elata127.630
SRR5643664five period of Gastrodia elata111.700
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1194.870
SRR6049655Rhizomagastrodiae_C368-T10_good_1139.760
SRR6049656Rhizomagastrodiae_C368-T07_good_1204.190
SRR6049657Rhizomagastrodiae_C368-T07_good_1201.370
SRR6049658Rhizomagastrodiae_C368-T04_good_1228.920
SRR6049659Rhizomagastrodiae_C368-T04_good_1244.090
SRR6049660Rhizomagastrodiae_C368-T01_good_1195.470
SRR6049661Rhizomagastrodiae_C368-T04_good_1242.720
SRR6049662Rhizomagastrodiae_C368-T01_good_1182.750
SRR6049663Rhizomagastrodiae_C368-T01_good_1189.510
SRR6049664Rhizomagastrodiae_C368-T10_good_1194.390
SRR6049665Rhizomagastrodiae_C368-T10_good_1194.390
SRP279888GastroGastrodia elata tuber 140.25
JuvenJuvenile tuber109.25
Mother_GastroMother tuber of Gastrodia elata 242.92
Mother_JuvenMother tuber of Juvenile 143.73