Gene detail

Detail information of GWHGAAEX012478/evm.TU.scaffold_44.4

Functional Annotation

Database	Orthologs	E value	Annotation
COG	gi\|56708011\|ref\|YP_169907.1\|	6.00E-15	hypothetical protein FTT_0910 [Francisella tularensis subsp. tularensis SCHU S4]
nr	gi\|573951605\|ref\|XP_006658083.1\|	2.30E-151	PREDICTED: GDSL esterase/lipase At2g23540-like [Oryza brachyantha]
Swissprot	tr\|O80470\|GDL38_ARATH	3.00E-146	GDSL esterase/lipase At2g23540 (Precursor)
trEMBL	tr\|J3MNW9\|J3MNW9_ORYBR	2.00E-151	Uncharacterized protein {ECO:0000313\|EnsemblPlants:OB07G31010.1}
TAIR	AT2G23540	1.00E-145	GDSL-like Lipase/Acylhydrolase superfamily protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000045	188707	190507	+

Transcript Sequence
>GWHTAAEX012478 AGATTGAGTGAAGTGCAGAAAAACCCAAAAGTTCAAACCAACCCACCAACTCGGCTCTGCAGTCGTGCAGGCACCCCTGCAAGTTAATATATTCGCTGTAATGAAATGAAATGAAGGGTGCCTATAAACCAGAACTGCTGCCTAGTGCTGGCATACGAATTCCAGTGACAGTAAAATGCCCTGCTCATTAATACCACCGCTGCTCATGATAGCCCTCTTTAGCACCATGGCCAGCTCGAGCAGCGCAGAGAATAACAGGCCGCCGGCCATTTTTGTCTTCGGTGACTCCCACGTGGACTCTGGAAACAACAACTACTTGCTGACTTCCCTGTCAAAAGCAAACCACCCTCCCAATGGCATCGACTTCAAGGCCTCCGGCGGTTTCCCCACAGGCCGCTTTACAAACGGCAGGACCATTGCCGACATCATTGGGGAAGAGCTTGGACAGCTGAATTACGCGCCGCCTTTTCTGGACCCGTACACAAACGGCGCATCCCTTTTGAATGGAGTCAACTATGCTTCTGGTGCTGGAGGAATACTGAATAAAACTGGAGCGCTCTACGTGAGCAGGCTCGGAATGAACCTGCAAATTGATTATTTTAACACTACCAGGCAGCAATTGGACGAGTTCTTAGGGAGGAATGAAGCCAGAGAGCTCGTATCCAATGCAATCTTCTCAATCACCATCGGAGCAAACGACTTTCTCAACAACTACCTGACTTTCATTACTGATTTCGAAGCTCCGGACGCATACATTAACAGACTAATGCTCGCACTAAAAGAGCAGCTTACAAGGCTTTACTGTCTTGATGCAAGAAACATTGTCATGGGGAGCATTGTGCCCATTGGATGCATCCCTTACCAAACATCCTTGGCTCCAGTTGATGAGACTGGCTGTGCCCCATTGCCTAACCAATTGGCTAAGATGTATAACGGAGAGCTACGCGATCTGCTTTCCAAACTGAACCAAATGCTCCCTGGATCGAATTTTCTTTATGCGAACTTGTACGATCTGTTCATGGATGTCATCACCAATCATCAGTCCTACGGATTTGAAACAGCGAGGGATGCTTGCTGTGGCAATGGCGGGATTCATGGAGGAGTTATTGCTTGCGGGCCGGCATCGAGCCTCTGCGGAGATCGCTCAAAATATGTGTATTGGGACCCTTACCATCCTACAGAGGCGGCTAATCTGTTGGTCGCAAAGAGGCTTGTCCATGGCAACCCAAAAGAAATCTCCCCAACAAACATTCGGCAGCTTTTGAATGCTTCCTATAACACTTGAGCACGGAATCGGGTTCAGCAAAGTTTGATTTTTTGCCAAGACTAAATGCAATTGATTGATTTCTAGGAATATTAACAGTACGTGAATTTAGAATCTCTGCGTCGCCCAAAAATTTATGTCTTTCCCTTCCTTCTGTAACAGGTGGATAGGAAAATTCTAAATTAGATCATTTCTTTTCTTATTTTATACGATTATTGTTATTATAAATGTGGGTATATATTTTCT

Network for GWHGAAEX012478

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
Module2

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00657.21	Lipase_GDSL	32	345	1.30E-13

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0016788	Molecular Function	hydrolase activity, acting on ester bonds

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	3.720
SRP064423	SRR2545915	Juvenile tuber	11.210
SRP108465	SRR5643513	five period of Gastrodia elata	5.760
	SRR5643514	five period of Gastrodia elata	3.050
	SRR5643515	five period of Gastrodia elata	2.380
	SRR5643524	five period of Gastrodia elata	2.250
	SRR5643525	five period of Gastrodia elata	0.680
	SRR5643528	five period of Gastrodia elata	0.160
	SRR5643658	five period of Gastrodia elata	0.210
	SRR5643659	five period of Gastrodia elata	1.160
	SRR5643660	five period of Gastrodia elata	0.680
	SRR5643661	five period of Gastrodia elata	0.690
	SRR5643662	five period of Gastrodia elata	1.550
	SRR5643663	five period of Gastrodia elata	1.630
	SRR5643664	five period of Gastrodia elata	0.180
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	3.560
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	11.910
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	5.310
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	4.640
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	3.600
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	1.780
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	3.610
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	4.250
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	3.990
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	1.800
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	6.920
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	6.920
SRP279888	Gastro	Gastrodia elata tuber	0.44
	Juven	Juvenile tuber	0.05
	Mother_Gastro	Mother tuber of Gastrodia elata	0.53
	Mother_Juven	Mother tuber of Juvenile	0.34