Detail information of GWHGAAEX012483/evm.TU.scaffold_44.10


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG07785.00E-94Protease, Ulp1 family
nrgi|672162553|ref|XP_008801096.1|3.89E-124PREDICTED: ubiquitin-like-specific protease ESD4 [Phoenix dactylifera]
Swissprottr|Q94F30|ESD4_ARATH3.00E-95Ubiquitin-like-specific protease ESD4
trEMBLtr|A0A096UC93|A0A096UC93_MAIZE1.00E-106Uncharacterized protein {ECO:0000313|EnsemblPlants:GRMZM5G849959_P01}
TAIRAT3G069105.00E-94UB-like protease 1A

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000045258205300237+
Transcript Sequence

Network for GWHGAAEX012483

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02902.18Peptidase_C481843642.40E-40
Protein Sequence

Gene family

Gene familysubfamily
Ubiquitin FamilyULP

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006508Biological Processproteolysis
GO:0008234Molecular Functioncysteine-type peptidase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms11.050
SRR2545915Juvenile tuber10.030
SRP108465SRR5643513five period of Gastrodia elata9.360
SRR5643514five period of Gastrodia elata10.430
SRR5643515five period of Gastrodia elata8.640
SRR5643524five period of Gastrodia elata10.730
SRR5643525five period of Gastrodia elata5.670
SRR5643528five period of Gastrodia elata5.290
SRR5643658five period of Gastrodia elata5.180
SRR5643659five period of Gastrodia elata10.070
SRR5643660five period of Gastrodia elata9.910
SRR5643661five period of Gastrodia elata9.430
SRR5643662five period of Gastrodia elata8.460
SRR5643663five period of Gastrodia elata8.220
SRR5643664five period of Gastrodia elata7.290
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_110.840
SRR6049655Rhizomagastrodiae_C368-T10_good_113.300
SRR6049656Rhizomagastrodiae_C368-T07_good_19.900
SRR6049657Rhizomagastrodiae_C368-T07_good_112.830
SRR6049658Rhizomagastrodiae_C368-T04_good_114.040
SRR6049659Rhizomagastrodiae_C368-T04_good_111.260
SRR6049660Rhizomagastrodiae_C368-T01_good_112.730
SRR6049661Rhizomagastrodiae_C368-T04_good_113.240
SRR6049662Rhizomagastrodiae_C368-T01_good_110.380
SRR6049663Rhizomagastrodiae_C368-T01_good_110.140
SRR6049664Rhizomagastrodiae_C368-T10_good_19.530
SRR6049665Rhizomagastrodiae_C368-T10_good_19.530
SRP279888GastroGastrodia elata tuber 7.76
JuvenJuvenile tuber17.34
Mother_GastroMother tuber of Gastrodia elata 7.49
Mother_JuvenMother tuber of Juvenile 13.05