Detail information of GWHGAAEX012485/evm.TU.scaffold_44.12


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|42524005|ref|NP_969385.1|1.00E-142multidrug ABC transporter permease/ATPase [Bdellovibrio bacteriovorus HD100]
KOGKOG00540Multidrug resistance-associated protein/mitoxantrone resistance protein, ABC superfamily
nrgi|672184579|ref|XP_008812600.1|0PREDICTED: ABC transporter C family member 14-like [Phoenix dactylifera]
Swissprottr|Q9LZJ5|AB14C_ARATH0ABC transporter C family member 14
trEMBLtr|K7VCA6|K7VCA6_MAIZE0Uncharacterized protein {ECO:0000313|EMBL:AFW80747.1, ECO:0000313|EnsemblPlants:GRMZM2G142870_P01}
TAIRAT3G627000multidrug resistance-associated protein 10

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000045303508306424+
Transcript Sequence

Network for GWHGAAEX012485

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module6

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00005.26ABC_tran261188.00E-10
PF00664.22ABC_membrane2665223.10E-17
PF00005.26ABC_tran6187668.40E-27
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0055085Biological Processtransmembrane transport
GO:0042626Molecular FunctionATPase activity, coupled to transmembrane movement of substances
GO:0005524Molecular FunctionATP binding
GO:0016887Molecular FunctionATPase activity
GO:0016021Cellular Componentintegral component of membrane

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms85.890
SRR2545915Juvenile tuber141.530
SRP108465SRR5643513five period of Gastrodia elata137.810
SRR5643514five period of Gastrodia elata112.150
SRR5643515five period of Gastrodia elata130.980
SRR5643524five period of Gastrodia elata111.340
SRR5643525five period of Gastrodia elata3.300
SRR5643528five period of Gastrodia elata22.310
SRR5643658five period of Gastrodia elata6.510
SRR5643659five period of Gastrodia elata112.070
SRR5643660five period of Gastrodia elata128.860
SRR5643661five period of Gastrodia elata109.390
SRR5643662five period of Gastrodia elata101.860
SRR5643663five period of Gastrodia elata56.880
SRR5643664five period of Gastrodia elata121.030
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1334.060
SRR6049655Rhizomagastrodiae_C368-T10_good_1102.110
SRR6049656Rhizomagastrodiae_C368-T07_good_1165.780
SRR6049657Rhizomagastrodiae_C368-T07_good_1404.660
SRR6049658Rhizomagastrodiae_C368-T04_good_1549.510
SRR6049659Rhizomagastrodiae_C368-T04_good_1864.420
SRR6049660Rhizomagastrodiae_C368-T01_good_1305.760
SRR6049661Rhizomagastrodiae_C368-T04_good_1395.350
SRR6049662Rhizomagastrodiae_C368-T01_good_1148.210
SRR6049663Rhizomagastrodiae_C368-T01_good_1196.090
SRR6049664Rhizomagastrodiae_C368-T10_good_187.360
SRR6049665Rhizomagastrodiae_C368-T10_good_187.360
SRP279888GastroGastrodia elata tuber 73.65
JuvenJuvenile tuber93.52
Mother_GastroMother tuber of Gastrodia elata 329.82
Mother_JuvenMother tuber of Juvenile 190.56