Detail information of GWHGAAEX012493/evm.TU.scaffold_44.20


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|743858813|ref|XP_010942456.1|9.31E-112PREDICTED: uncharacterized protein LOC105060444 [Elaeis guineensis]
trEMBLtr|M0TSJ1|M0TSJ1_MUSAM2.00E-92Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr8P21880_001}
TAIRAT5G567805.00E-65effector of transcription2

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000045487058492219+
Transcript Sequence

Network for GWHGAAEX012493

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyHRT

KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms7.820
SRR2545915Juvenile tuber7.140
SRP108465SRR5643513five period of Gastrodia elata11.170
SRR5643514five period of Gastrodia elata14.510
SRR5643515five period of Gastrodia elata13.160
SRR5643524five period of Gastrodia elata15.290
SRR5643525five period of Gastrodia elata14.420
SRR5643528five period of Gastrodia elata16.010
SRR5643658five period of Gastrodia elata17.400
SRR5643659five period of Gastrodia elata11.750
SRR5643660five period of Gastrodia elata10.490
SRR5643661five period of Gastrodia elata13.040
SRR5643662five period of Gastrodia elata16.690
SRR5643663five period of Gastrodia elata17.870
SRR5643664five period of Gastrodia elata13.390
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_122.150
SRR6049655Rhizomagastrodiae_C368-T10_good_119.250
SRR6049656Rhizomagastrodiae_C368-T07_good_122.780
SRR6049657Rhizomagastrodiae_C368-T07_good_120.850
SRR6049658Rhizomagastrodiae_C368-T04_good_127.180
SRR6049659Rhizomagastrodiae_C368-T04_good_133.790
SRR6049660Rhizomagastrodiae_C368-T01_good_128.030
SRR6049661Rhizomagastrodiae_C368-T04_good_128.220
SRR6049662Rhizomagastrodiae_C368-T01_good_125.980
SRR6049663Rhizomagastrodiae_C368-T01_good_132.320
SRR6049664Rhizomagastrodiae_C368-T10_good_119.940
SRR6049665Rhizomagastrodiae_C368-T10_good_119.940
SRP279888GastroGastrodia elata tuber 32.35
JuvenJuvenile tuber14.61
Mother_GastroMother tuber of Gastrodia elata 42.18
Mother_JuvenMother tuber of Juvenile 14.49