Detail information of GWHGAAEX012506/evm.TU.scaffold_44.36
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| KOG | KOG2922 | 3.00E-165 | Uncharacterized conserved protein |
| nr | gi|695053993|ref|XP_009415110.1| | 1.58E-172 | PREDICTED: magnesium transporter NIPA2-like [Musa acuminata subsp. malaccensis] |
| Swissprot | tr|Q9LNK7|NIPA3_ARATH | 9.00E-166 | Probable magnesium transporter NIPA3 |
| trEMBL | tr|M0TUD4|M0TUD4_MUSAM | 6.00E-173 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr8P28310_001} |
| TAIR | AT1G34470 | 3.00E-165 | Protein of unknown function (DUF803) |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000045 | 556404 | 562543 | + |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX012506
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|---|
| Module2 |
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF05653.13 | Mg_trans_NIPA | 5 | 297 | 1.90E-135 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| -- | -- | -- | -- |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0015693 | Biological Process | magnesium ion transport |
| GO:0015095 | Molecular Function | magnesium ion transmembrane transporter activity |
| GO:0016021 | Cellular Component | integral component of membrane |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 2.000 |
| SRR2545915 | Juvenile tuber | 3.040 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 6.630 |
| SRR5643514 | five period of Gastrodia elata | 7.470 | |
| SRR5643515 | five period of Gastrodia elata | 8.800 | |
| SRR5643524 | five period of Gastrodia elata | 6.890 | |
| SRR5643525 | five period of Gastrodia elata | 1.140 | |
| SRR5643528 | five period of Gastrodia elata | 1.980 | |
| SRR5643658 | five period of Gastrodia elata | 1.070 | |
| SRR5643659 | five period of Gastrodia elata | 3.260 | |
| SRR5643660 | five period of Gastrodia elata | 2.450 | |
| SRR5643661 | five period of Gastrodia elata | 4.130 | |
| SRR5643662 | five period of Gastrodia elata | 3.650 | |
| SRR5643663 | five period of Gastrodia elata | 2.640 | |
| SRR5643664 | five period of Gastrodia elata | 2.930 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 12.260 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 21.750 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 9.340 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 5.310 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 10.850 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 7.960 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 6.980 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 6.670 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 10.340 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 11.910 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 21.600 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 21.600 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 3.23 |
| Juven | Juvenile tuber | 4.74 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 6.19 | |
| Mother_Juven | Mother tuber of Juvenile | 7.16 |