Gene detail

Detail information of GWHGAAEX012514/evm.TU.scaffold_44.44

Functional Annotation

Database	Orthologs	Annotation
KOG	KOG0565	Inositol polyphosphate 5-phosphatase and related proteins
nr	gi\|743806138\|ref\|XP_010927608.1\|	PREDICTED: type I inositol 1,4,5-trisphosphate 5-phosphatase 13-like [Elaeis guineensis]
Swissprot	tr\|O80560\|IP5PC_ARATH	Type I inositol 1,4,5-trisphosphate 5-phosphatase 12
trEMBL	tr\|M0U592\|M0U592_MUSAM	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_AchrUn_randomP00800_001}
TAIR	AT2G43900	Endonuclease/exonuclease/phosphatase family protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000045	686784	710962	+

Transcript Sequence
>GWHTAAEX012514 GTTTGTTCACCTGCTGGCAGCATCTGTAGGCCATCCATCATCGTCAAATCTTCGACCAACGGCGGATTTTAAATTTCGCATAGAGGTTTTTATGCGGAATTCATCAGCATAATCTCCCGCTGCCTGCCCTTTTCCATTTCTTCGTCTTCTTCCGTAATGACGAAGTGATCTCGAGAATGAACGGGAAAAAGGAAGAAGACGATGGCGGTCGTCATTTTGTCACCGTCTCTGCTGACTCCTGCGTTCGTCAACACAAGGGAATTATGCAGTTCTATAGTCAGTCTTCGGATCCAGACGCTGTTTCTGAGGAAGATTTATACAATCCTTTCTACTCAGATCCTGCAGGTGCTGCTGCTTCCGGATTTGAAGAAGATTTATCGTTTTCCTGCCTCCATTACGGTACTTCCTCGTCGCTATCGTTGGAGGATGTCCGATTTGAAAACCCTATGATGTGCCCCCTCGATCGCCGGCGCAGCAGCGACGGCAGTTCCATCTCTCTGAGTGAGGAAACCCTAACCTTTGACGGGAGTTTTCCGGAGTTTATGGGAACTGGAGGCGGCGGCGGGATTTTCCGCCTTCCGATCCGAGCCGCGATGCAGCCCGGCCGACCGCCGGCGCTGGAACTCCGGCCGCACCCGTTGAGAGAGACCCAAGCGGGTTCCTTCTTGCGCACTATCGTCTGCACCAACTCCCAGCTTTGGTCAGGTATGGAGTCAGGATTGAGATTCTGGAATCTTTCCGAGGTGTTTGAGAGTTGGAACGGGAGACCGGCCAAGGCTGGGGACGAGGAGAGTGCCCCCTTTTATGAGTCCGGCCGCACTTCGCCAGTGTTTTGCTTGGTGGCGGACGAGGCGAGTGGGTTCGTGTGGAGTGGGCACAAGGACGGGAGGATTAGGTCATGGAGGATTCCAAAGCTTGAATTGGATGGTTCTTTGAAGGAGGAGGATGATGGAATTGGAACCAGAACAGTTGGTGAAGGAACTGGTGAGCCTGGATCTCCTTTTAGAGAAGGTCTCTCGTGGCAGGCCCATCGATCTCCTGTTCTATCCATGATCATTACTTCGTATGGTGATTTATGGGTAGGTTTTGAGGGTGGAGTTTTGAAAGCCTGGCCATGGGAATCCATTGAAAAGGCACTTTCCTTAACAGTAGAAGAAAGACACATGGCTACTTTACTTATTGAAAGGTCGTATATTGATCTTAGGAGCAGGGTTACTATAAATGGGGTGTGTTCCCTCCCAGCTGTAGATATCAAATTTCTGTTATCTGACAACTCTAGTTCTAAGGTGTGGAGTGCTGGTAGCACAGTTTTTGCACTATGGGATTCCCGAAAAAAAGAGCTTTTGAAAGTCTTTAACATTGATGGCCAGGTTGAGAACCGGATTGACATAGCACAGCCTCTGGAGTTCAATGTGGAGGATGAGATTAAGTTCAAGTTACTAAAGAAAGAAAAGTCAGGATCTATAAGTTTTTTGCAACGCTCTCGAAATGCCTTGTTGGGTGCTGCTGATGCTGTTCGCAGAGTTACACAAAAAGGAGCATTCCCAGAAGATAATCGAAGAACAGAAGCACTAGTTATGACAATGGATGGAATGATTTGGAGTGGGTGCACAAATGGTTCTCTTGTTCAGTGGGACGGAAATGGAAATAAGCAATTTGAAGTTCAGCATCATTCTTTGGCTATAAAGAGCATTTGTGCCTTCCGAACACGGTTGTGGGTGGGCTATGTGGATGGTAACATTCATGTTTTGGATATTGAAGGATATTTACTTGGTGGTTGGGTTGCTCATTGTGGTCCTGTTATAACGATGAACATTGGTGCTTCTTATATCTTTACTTTGGCTTACCATGGTGAGATTCATGCTTGGAGTCTGGCTGCACCGGGTCCAATTGATGACATTTTACGAATGGAACTGTCCAGTAAGGAACTTGCGTACACAAAAGTGGAAAATTTTAAAATATTGACCGGTACTTGGAATGTTGGACAAGAAAGAGCCTCTTTTGATTCTCTCATATCATGGCTGGGAAGTGCAGCAACAGAAGTCAGTTTGGTTGTCGTTGGCCTTCAAGAAGTTGAAATGGGTGCCGGATTTCTTGCAATGGCTGCTGCAAAAGAGACTGTAGGAATTGAAGGGAGTGCAAATGGGCAATGGTGGTTGGATGCTATCGGTAAGACCTTAGATGAAGGAACATCTTTTGAGTGTGTAGGCTCGAGGCAGCTTGCTGGGTTGCTTATTGCAGCATGGGTTAGGAAAAGCTTTAGAGTGAATGTTGGTGATGTTGATGCTGCAGCTGTGGCATGTGGTTTTGGACGAACCATAGGAAACAAGGGGGCTGTCGGGCTGAGAATGCGGGTCTTTGACAGCATCATCTGCTTTGTCTGTTGTCATTTTGCTGCTCATTTGGAAGCAGTCAGCAAGAGAAACGCCGACTTCAATCATGTTTATCGTACTTTATCCTTCACCCGGCCTTCTGTAGTACCAAATTCTGGTTCAGCGGGTGCTACGTCAGTGGAAGTTCATCGAGGAGGGAATCTGACAGGGCCCCAGGTTGAAGAGAGGCTGGTGGAATTATCGGATGCAGATATGGTTGTCTTTCTCGGCGACTTCAATTACCGGCTCTCCGGCGTGTCTTATGATGAGGTGAGGGACATGATTTCCCAAAGATGCTTTGATTGGCTGAGAGAAAGGGACCAGCTCCGGACCGAGATGATGCTGGGCAGGGCCTTTCAAGGCTTGCGCGAGGCTCATATCGTCTTCCCTCCCACTTACAAGTTTGACAAGCACCAGCCTGGACTCTCAGCATATGATTCTAGTGAGAAAAAACGCATCCCGGCTTGGTGTGACAGAATCTTGTATCGTGATAGCCGTTTTATCTCGGTGGCCGAATGCTCACTGGAATGCCCTGTTGTTGCTTCCATTTCGCTCTACGAGTCATGCATGGACGTGACGGACAGCGACCACAAGCCCGTCCGGTGCTTATTCGGTCTCGAGATCGCCTGTGTGGATCGTGCAGCGAGGAGGCGCGAGTTCGGGACATTACTTGCATCGCACAAGGGAATCAAGCCTCTGCTGGAGGAATATGGAATTGTTCCAGAAACAATAGTCAGCACAAACAACATCTTACTGCAGAATCAAGACACCTCTTCCATCCTTCGAATAACAAACAAGAGCGAAAATTGCAGTGCTTGCTTCGAGATCATCTGTGAGGGTCAATTCACATCAAAGGATGTTAGAACTTGCATAAGAGGTTCCTTTGGCTTTCCCACTTGGTTGCAGGTGGAGCCTGCGACGGGAATCATCGGGCCGGGGGAAGTCGCCGAAGTCACAGTGCACCACGAGGACTTCTGGACGCAGGAAGAATTTGTCGATGGGATACCGCAGAATTGGTGGTGCGAAAACGCAAGGGATAAGGAGGCAGTGCTGCTGGTCAGAGTCGCTGGCAGCTTTTCGCCGGAGATCAGATGCCACCGAGTTCACGTCCGCCATTGCTACCCTGTCAATTGTCCCTCCAAAAGAGATTTCGAGCGGTTGCCAGTGAATCACGACCACCTGCACAGGTCCGATTTCACAAATTTCGGCAGCTCAGATGTGGAGAATCTGCTTGCTGGTAAATTAGGAGATTGAAGACGGCTGCTAAGGAGAATTATAAATATCCTAAACGAAAATTTGTCCCACAAATTATATATATATCTAACACCTATCTTTTAATATTTACAAAATTAATTCCTCTCCTTTCTGTAGGAAATTTAGTAATATTTAGATTCAGGTGTTATTTGTGTAAAAATAAATTTGAAAAATTATGTGATATTTTTTGTAAATATTAAATAGGGAGGAGAAATTGTAATATTTAAATACTGTCTCTTCGGATTTTTTATTTTTGGCTTTGTTCTTGTGTAGTGCTAATTGCATCATATTGTACTTTAGCAATGTAATATGTAAATATTTTATTAATT

Network for GWHGAAEX012514

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF03372.22	Exo_endo_phos	598	929	6.00E-13

Protein Sequence

>GWHPAAEX012514
MNGKKEEDDGGRHFVTVSADSCVRQHKGIMQFYSQSSDPDAVSEEDLYNPFYSDPAGAAASGFEEDLSFSCLHYGTSSSLSLEDVRFENPMMCPLDRRRSSDGSSISLSEETLTFDGSFPEFMGTGGGGGIFRLPIRAAMQPGRPPALELRPHPLRETQAGSFLRTIVCTNSQLWSGMESGLRFWNLSEVFESWNGRPAKAGDEESAPFYESGRTSPVFCLVADEASGFVWSGHKDGRIRSWRIPKLELDGSLKEEDDGIGTRTVGEGTGEPGSPFREGLSWQAHRSPVLSMIITSYGDLWVGFEGGVLKAWPWESIEKALSLTVEERHMATLLIERSYIDLRSRVTINGVCSLPAVDIKFLLSDNSSSKVWSAGSTVFALWDSRKKELLKVFNIDGQVENRIDIAQPLEFNVEDEIKFKLLKKEKSGSISFLQRSRNALLGAADAVRRVTQKGAFPEDNRRTEALVMTMDGMIWSGCTNGSLVQWDGNGNKQFEVQHHSLAIKSICAFRTRLWVGYVDGNIHVLDIEGYLLGGWVAHCGPVITMNIGASYIFTLAYHGEIHAWSLAAPGPIDDILRMELSSKELAYTKVENFKILTGTWNVGQERASFDSLISWLGSAATEVSLVVVGLQEVEMGAGFLAMAAAKETVGIEGSANGQWWLDAIGKTLDEGTSFECVGSRQLAGLLIAAWVRKSFRVNVGDVDAAAVACGFGRTIGNKGAVGLRMRVFDSIICFVCCHFAAHLEAVSKRNADFNHVYRTLSFTRPSVVPNSGSAGATSVEVHRGGNLTGPQVEERLVELSDADMVVFLGDFNYRLSGVSYDEVRDMISQRCFDWLRERDQLRTEMMLGRAFQGLREAHIVFPPTYKFDKHQPGLSAYDSSEKKRIPAWCDRILYRDSRFISVAECSLECPVVASISLYESCMDVTDSDHKPVRCLFGLEIACVDRAARRREFGTLLASHKGIKPLLEEYGIVPETIVSTNNILLQNQDTSSILRITNKSENCSACFEIICEGQFTSKDVRTCIRGSFGFPTWLQVEPATGIIGPGEVAEVTVHHEDFWTQEEFVDGIPQNWWCENARDKEAVLLVRVAGSFSPEIRCHRVHVRHCYPVNCPSKRDFERLPVNHDHLHRSDFTNFGSSDVENLLAGKLGD

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0046856	Biological Process	phosphatidylinositol dephosphorylation
GO:0005515	Molecular Function	protein binding

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	24.990
SRP064423	SRR2545915	Juvenile tuber	26.740
SRP108465	SRR5643513	five period of Gastrodia elata	27.890
	SRR5643514	five period of Gastrodia elata	21.320
	SRR5643515	five period of Gastrodia elata	23.450
	SRR5643524	five period of Gastrodia elata	23.130
	SRR5643525	five period of Gastrodia elata	63.410
	SRR5643528	five period of Gastrodia elata	44.740
	SRR5643658	five period of Gastrodia elata	55.370
	SRR5643659	five period of Gastrodia elata	32.050
	SRR5643660	five period of Gastrodia elata	46.810
	SRR5643661	five period of Gastrodia elata	37.530
	SRR5643662	five period of Gastrodia elata	34.650
	SRR5643663	five period of Gastrodia elata	32.490
	SRR5643664	five period of Gastrodia elata	42.720
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	34.220
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	26.760
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	30.380
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	41.940
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	45.910
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	49.600
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	37.160
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	43.220
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	24.350
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	31.480
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	23.460
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	23.460
SRP279888	Gastro	Gastrodia elata tuber	42.32
	Juven	Juvenile tuber	59.10
	Mother_Gastro	Mother tuber of Gastrodia elata	64.18
	Mother_Juven	Mother tuber of Juvenile	82.01