Gene detail

Detail information of GWHGAAEX012521/evm.TU.scaffold_44.53

Functional Annotation

Database	Orthologs	E value	Annotation
COG	gi\|302343553\|ref\|YP_003808082.1\|	2.00E-09	major facilitator superfamily protein [Desulfarculus baarsii DSM 2075]
nr	gi\|641845017\|gb\|KDO63907.1\|	0	hypothetical protein CISIN_1g007654mg [Citrus sinensis]
trEMBL	tr\|A0A067FKD0\|A0A067FKD0_CITSI	0	Uncharacterized protein {ECO:0000313\|EMBL:KDO63907.1}
TAIR	AT5G14120	0	Major facilitator superfamily protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000045	875268	878650	+

Transcript Sequence
>GWHTAAEX012521 CTGTAATGAAAATTGTAAGGATACTAATAAAATAATATATTTATACGAGAATTTCTCTATTTTTTTAGAATAAACTGCTAATACAGAAAAAAAAAACAGTTTAAATAAGAAGAATTCCACTTCTTCCTCCATTGTAAAAGAAAAGAGAGCAACAATGGGAGAAATGGAGGTACCAATGGCCCTTTCCTCCTTTTTAAGGGATCGATGGGTCATCTTCGTCTGCTCAATGTGGATGGAATCCGTTGCCGGCGTCGGATACCTTTTCGGCAGCATCTCCACTTCCATAAAGAGCTCCACGGGCTTCAACCAGCGGGAGATCGCCGCCCTCGGCCTCGCTCAGGATCTCGGCGGCAGCCTCGGCTTTCTCGCCGGAGTTCTCTCCGAACGCTTCCCCATCTGGGCGGTGCTTGTTGTCGGCTCTCTACAGAATTTGATTGGCTACGGCTGGATTTGGCTCATCGTCTCCGGCCGTGCGGCGCCTGCGCCTCTTTCCGCGATGTGCGTTCTCATATTTGTTGGCAACAATGGACAAACATACTTCAACACAGCAGCTCTCATTTCTTGCGTCCAAAACTTTCCTAAGAGCAGAGGTCCGGTAGTAGGAATCTTGAAAGGCTTTGCCGGCCTTAGCGGTGCAATCCTGACTCAGATATACACCTCAATACACTCACCAGATAATGCCACCCTAATCTTTATGGCAGCGGTTGGACCTCCCATGGTGGTGATCGCCCTAATGTTTATTATCAAGCCAGTTTCAGGGCACCAACAAACAGCCATGCAGCCATCAGATAGATCCAGCTTTGTGTTCATCCACAGTGTTTGCTTGCTTTTGGCTGCTTACCTGATGGGCGCCCTGCTTCTTGAAGATCTTGTCGAATTGGGCCATAATGTCATCACCTTGCTCACAGTTGTGCTCCTAATTCTGCTAATTGCACCCATCACAATTCCTCTAATCTCGTCCATCGGTTTACGCCCTACTTCGGCCAATCAGGAGAGCCTCTTGCTCGAAAGTCAAGAAGAAGAGCAGATTGAGGTAATCTTGAGTGAGGTGGAGGACGAGAAGTCTAAGAACGTTGATATGCTTCCTGAGCTGGAGAGAGCGAATATGATTCAGAAACTACACGCCAAAGTGTTTCAGGCTGCAGCAGTGGGAGCTGTGAGGGTAGAGAATAGGAGAGGACCGCGTAGGGGAGAGAACTTCACCTTGTGTCAGGCTCTCGTAAAAGCAGATTTTTGGCTTTTGTTCATGTCTCAAGTGTTGGGGGCAGGTTCGGGGTTGACGGTTATTGATAATTTAGGACAGATAAGCCAATCTTTGGGCTATAATAAGACGCACATTTTCATTTCGATGATTTGCATATGGAATTTTCTTGGGCGGATCGGCGGCGGCTATTTGTCAGAGATAATAGTCAGGGATTATGCATATCCGAGGCCCGTAGCTCTGGCAGTTGCTCAGGGTGTGATGGCGGTGGGACTTTTGTTCATCGGAATGGGTTGGTCGGGAGGGTTGTATATCGGAACACTTCTAATAGGGCTTGGCTATGGAGCTCATTGGGCCATTGTGCCTGCTGCTGCCTCCGAACTGTTCGGGTTGAAGAACTTTGGATCTTTGTATAATTTCCTCTCATGTGCAATGCCTGCAGGCTCCCTAATATGCTCACAACTAATTGCAAGTACTATATATGAATATGAGGCTGAGAGGCAAGCTCACAAGAATCATCTCTCAGCAGTCCTTGTTGGAGGGCTATTGGCAGAAGAGGCACTAAAGTGTGAAGGAGCTGTCTGCTTCTTCCTTTCTTGTATGATAATGTCAGGACTCTGCATCGTTGCAGTTATTTTGAGCTCAGTTCTTGTTCATAGGACCAAGATTGTATATACCAATCTTTATGAGAAAGTTAATTTTTGACTTTGTTATAAAGTGTCTCCTAAAGCAGAAGGGTATATAGACCCTATAATCTGGTTTTAAAACACATGTTTTTTGTAAGAAATTATTAGCATCTTTTATTCGGATGGTTTGTTGTAAAAAGCGTGTGCATGTTGCTGTAATCCTATTCTTTCAATCAAGTCTAAGAAAAAACATTCATAGAACTTGAATTAATCATGGTTTTGAGAACATTAAAGTTATAGTTAATAAGAGGTCCGTGAACAATGCACATTAAGTTATATTTACTATCTTCAGTGACTTCGTT

Network for GWHGAAEX012521

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
Module5

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF06813.12	Nodulin-like	17	266	4.60E-87

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	18.120
SRP064423	SRR2545915	Juvenile tuber	5.110
SRP108465	SRR5643513	five period of Gastrodia elata	39.450
	SRR5643514	five period of Gastrodia elata	83.460
	SRR5643515	five period of Gastrodia elata	76.290
	SRR5643524	five period of Gastrodia elata	71.710
	SRR5643525	five period of Gastrodia elata	1.400
	SRR5643528	five period of Gastrodia elata	1.220
	SRR5643658	five period of Gastrodia elata	1.890
	SRR5643659	five period of Gastrodia elata	4.870
	SRR5643660	five period of Gastrodia elata	5.100
	SRR5643661	five period of Gastrodia elata	7.140
	SRR5643662	five period of Gastrodia elata	3.260
	SRR5643663	five period of Gastrodia elata	2.520
	SRR5643664	five period of Gastrodia elata	0.820
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	16.090
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	20.440
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	15.390
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	13.720
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	9.100
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	13.040
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	14.480
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	7.340
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	19.080
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	20.140
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	14.420
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	14.420
SRP279888	Gastro	Gastrodia elata tuber	2.49
	Juven	Juvenile tuber	9.79
	Mother_Gastro	Mother tuber of Gastrodia elata	23.59
	Mother_Juven	Mother tuber of Juvenile	10.78