Detail information of GWHGAAEX012526/evm.TU.scaffold_44.59


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|374316731|ref|YP_005063159.1|1.00E-09Zn-dependent oxidoreductase [Sphaerochaeta pleomorpha str. Grapes]
KOGKOG11982.00E-44Zinc-binding oxidoreductase
nrgi|672141624|ref|XP_008794648.1|8.33E-52PREDICTED: LOW QUALITY PROTEIN: putative quinone-oxidoreductase homolog, chloroplastic [Phoenix dactylifera]
Swissprottr|Q9SV68|QORH_ARATH5.00E-45Putative quinone-oxidoreductase homolog, chloroplastic
trEMBLtr|M0RQJ5|M0RQJ5_MUSAM3.00E-51Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr11P08650_001}
TAIRAT4G130102.00E-44Oxidoreductase, zinc-binding dehydrogenase family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000045960182960583-
Transcript Sequence

Network for GWHGAAEX012526

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module6

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF13602.5ADH_zinc_N_211316.70E-21
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K00224CEQORH Biosynthesis of secondary metabolites map01110
alpha-Linolenic acid metabolismmap00592

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms38.730
SRR2545915Juvenile tuber34.170
SRP108465SRR5643513five period of Gastrodia elata7.410
SRR5643514five period of Gastrodia elata9.310
SRR5643515five period of Gastrodia elata18.070
SRR5643524five period of Gastrodia elata10.870
SRR5643525five period of Gastrodia elata12.300
SRR5643528five period of Gastrodia elata14.430
SRR5643658five period of Gastrodia elata10.920
SRR5643659five period of Gastrodia elata13.650
SRR5643660five period of Gastrodia elata15.610
SRR5643661five period of Gastrodia elata14.600
SRR5643662five period of Gastrodia elata15.770
SRR5643663five period of Gastrodia elata16.630
SRR5643664five period of Gastrodia elata15.800
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_132.100
SRR6049655Rhizomagastrodiae_C368-T10_good_16.880
SRR6049656Rhizomagastrodiae_C368-T07_good_142.330
SRR6049657Rhizomagastrodiae_C368-T07_good_138.650
SRR6049658Rhizomagastrodiae_C368-T04_good_159.730
SRR6049659Rhizomagastrodiae_C368-T04_good_169.580
SRR6049660Rhizomagastrodiae_C368-T01_good_154.840
SRR6049661Rhizomagastrodiae_C368-T04_good_159.510
SRR6049662Rhizomagastrodiae_C368-T01_good_149.010
SRR6049663Rhizomagastrodiae_C368-T01_good_149.360
SRR6049664Rhizomagastrodiae_C368-T10_good_125.630
SRR6049665Rhizomagastrodiae_C368-T10_good_125.630
SRP279888GastroGastrodia elata tuber 29.87
JuvenJuvenile tuber11.66
Mother_GastroMother tuber of Gastrodia elata 23.95
Mother_JuvenMother tuber of Juvenile 13.35