Detail information of GWHGAAEX012527/evm.TU.scaffold_44.60


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|428202942|ref|YP_007081531.1|3.00E-40Zn-dependent oxidoreductase [Pleurocapsa sp. PCC 7327]
KOGKOG11987.00E-71Zinc-binding oxidoreductase
nrgi|661892770|emb|CDP03928.1|7.48E-78unnamed protein product [Coffea canephora]
Swissprottr|Q8H0M1|QORH_SPIOL3.00E-74Quinone-oxidoreductase homolog, chloroplastic
trEMBLtr|A0A068U8I9|A0A068U8I9_COFCA3.00E-78Coffea canephora
TAIRAT4G130107.00E-71Oxidoreductase, zinc-binding dehydrogenase family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000045960596984031-
Transcript Sequence

Network for GWHGAAEX012527

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module6

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF08240.11ADH_N35963.50E-10
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K00224CEQORH Biosynthesis of secondary metabolites map01110
alpha-Linolenic acid metabolismmap00592

Gene Ontology

GO term OntologyName
GO:0055114Biological Processoxidation-reduction process
GO:0016491Molecular Functionoxidoreductase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms38.330
SRR2545915Juvenile tuber37.960
SRP108465SRR5643513five period of Gastrodia elata9.660
SRR5643514five period of Gastrodia elata9.060
SRR5643515five period of Gastrodia elata12.750
SRR5643524five period of Gastrodia elata9.290
SRR5643525five period of Gastrodia elata10.830
SRR5643528five period of Gastrodia elata9.820
SRR5643658five period of Gastrodia elata7.850
SRR5643659five period of Gastrodia elata10.620
SRR5643660five period of Gastrodia elata14.100
SRR5643661five period of Gastrodia elata12.690
SRR5643662five period of Gastrodia elata11.670
SRR5643663five period of Gastrodia elata13.260
SRR5643664five period of Gastrodia elata16.130
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_140.040
SRR6049655Rhizomagastrodiae_C368-T10_good_127.510
SRR6049656Rhizomagastrodiae_C368-T07_good_138.580
SRR6049657Rhizomagastrodiae_C368-T07_good_143.780
SRR6049658Rhizomagastrodiae_C368-T04_good_172.510
SRR6049659Rhizomagastrodiae_C368-T04_good_188.230
SRR6049660Rhizomagastrodiae_C368-T01_good_157.910
SRR6049661Rhizomagastrodiae_C368-T04_good_159.800
SRR6049662Rhizomagastrodiae_C368-T01_good_151.860
SRR6049663Rhizomagastrodiae_C368-T01_good_163.910
SRR6049664Rhizomagastrodiae_C368-T10_good_132.760
SRR6049665Rhizomagastrodiae_C368-T10_good_132.760
SRP279888GastroGastrodia elata tuber 29.75
JuvenJuvenile tuber10.41
Mother_GastroMother tuber of Gastrodia elata 17.97
Mother_JuvenMother tuber of Juvenile 10.30