Detail information of GWHGAAEX012528/evm.TU.scaffold_44.61


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG31429.00E-74Prenylated rab acceptor 1
nrgi|672136956|ref|XP_008792185.1|1.03E-78PREDICTED: PRA1 family protein B3-like [Phoenix dactylifera]
Swissprottr|O80915|PR1B4_ARATH3.00E-74PRA1 family protein B4
trEMBLtr|V7BA38|V7BA38_PHAVU8.00E-75Uncharacterized protein {ECO:0000313|EMBL:ESW13718.1}
TAIRAT2G383609.00E-74prenylated RAB acceptor 1.B4

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000045985463987270+
Transcript Sequence

Network for GWHGAAEX012528

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03208.18PRA1431852.70E-46
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms15.250
SRR2545915Juvenile tuber12.000
SRP108465SRR5643513five period of Gastrodia elata18.100
SRR5643514five period of Gastrodia elata16.680
SRR5643515five period of Gastrodia elata30.180
SRR5643524five period of Gastrodia elata18.910
SRR5643525five period of Gastrodia elata34.780
SRR5643528five period of Gastrodia elata49.000
SRR5643658five period of Gastrodia elata34.840
SRR5643659five period of Gastrodia elata19.300
SRR5643660five period of Gastrodia elata14.790
SRR5643661five period of Gastrodia elata22.880
SRR5643662five period of Gastrodia elata27.330
SRR5643663five period of Gastrodia elata18.490
SRR5643664five period of Gastrodia elata26.870
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_126.110
SRR6049655Rhizomagastrodiae_C368-T10_good_157.560
SRR6049656Rhizomagastrodiae_C368-T07_good_131.390
SRR6049657Rhizomagastrodiae_C368-T07_good_122.970
SRR6049658Rhizomagastrodiae_C368-T04_good_116.870
SRR6049659Rhizomagastrodiae_C368-T04_good_118.350
SRR6049660Rhizomagastrodiae_C368-T01_good_131.070
SRR6049661Rhizomagastrodiae_C368-T04_good_120.820
SRR6049662Rhizomagastrodiae_C368-T01_good_134.910
SRR6049663Rhizomagastrodiae_C368-T01_good_142.150
SRR6049664Rhizomagastrodiae_C368-T10_good_139.950
SRR6049665Rhizomagastrodiae_C368-T10_good_139.950
SRP279888GastroGastrodia elata tuber 13.58
JuvenJuvenile tuber7.98
Mother_GastroMother tuber of Gastrodia elata 44.95
Mother_JuvenMother tuber of Juvenile 29.04