Detail information of GWHGAAEX012539/evm.TU.scaffold_44.72


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|389875699|ref|YP_006373434.1|3.00E-20enoyl-CoA hydratase [Tistrella mobilis KA081020-065]
KOGKOG16811.00E-28Enoyl-CoA isomerase
nrgi|695045534|ref|XP_009410564.1|1.68E-37PREDICTED: delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial [Musa acuminata subsp. malaccensis]
trEMBLtr|M0TJT3|M0TJT3_MUSAM6.00E-38Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr7P22470_001}
TAIRAT5G432801.00E-28delta(3,5),delta(2,4)-dienoyl-CoA isomerase 1

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000004512165631220624+
Transcript Sequence

Network for GWHGAAEX012539

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module6

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00378.19ECH_1141045.00E-07
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K12663ECH1 Peroxisome map04146

Gene Ontology

GO term OntologyName
GO:0003824Molecular Functioncatalytic activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms14.710
SRR2545915Juvenile tuber22.800
SRP108465SRR5643513five period of Gastrodia elata21.890
SRR5643514five period of Gastrodia elata27.940
SRR5643515five period of Gastrodia elata22.770
SRR5643524five period of Gastrodia elata26.610
SRR5643525five period of Gastrodia elata30.130
SRR5643528five period of Gastrodia elata19.890
SRR5643658five period of Gastrodia elata35.340
SRR5643659five period of Gastrodia elata21.960
SRR5643660five period of Gastrodia elata33.980
SRR5643661five period of Gastrodia elata12.420
SRR5643662five period of Gastrodia elata42.130
SRR5643663five period of Gastrodia elata43.240
SRR5643664five period of Gastrodia elata48.010
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_184.210
SRR6049655Rhizomagastrodiae_C368-T10_good_1136.330
SRR6049656Rhizomagastrodiae_C368-T07_good_195.320
SRR6049657Rhizomagastrodiae_C368-T07_good_182.130
SRR6049658Rhizomagastrodiae_C368-T04_good_180.990
SRR6049659Rhizomagastrodiae_C368-T04_good_187.610
SRR6049660Rhizomagastrodiae_C368-T01_good_1100.920
SRR6049661Rhizomagastrodiae_C368-T04_good_1103.610
SRR6049662Rhizomagastrodiae_C368-T01_good_1152.290
SRR6049663Rhizomagastrodiae_C368-T01_good_1155.020
SRR6049664Rhizomagastrodiae_C368-T10_good_179.680
SRR6049665Rhizomagastrodiae_C368-T10_good_179.680
SRP279888GastroGastrodia elata tuber 192.30
JuvenJuvenile tuber57.56
Mother_GastroMother tuber of Gastrodia elata 69.19
Mother_JuvenMother tuber of Juvenile 37.58