Detail information of GWHGAAEX012543/evm.TU.scaffold_44.76
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| nr | gi|672129522|ref|XP_008788271.1| | 2.38E-138 | PREDICTED: inositol-tetrakisphosphate 1-kinase 4 isoform X3 [Phoenix dactylifera] |
| Swissprot | tr|O80568|ITPK4_ARATH | 4.00E-114 | Inositol-tetrakisphosphate 1-kinase 4 |
| trEMBL | tr|M0Y2F2|M0Y2F2_HORVD | 2.00E-133 | Uncharacterized protein {ECO:0000313|EnsemblPlants:MLOC_65109.9} (Fragment) |
| TAIR | AT2G43980 | 2.00E-71 | inositol 1,3,4-trisphosphate 5/6-kinase 4 |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000045 | 1296304 | 1307999 | - |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX012543
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF05770.10 | Ins134_P3_kin | 17 | 309 | 1.20E-39 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| K01765 | ITPK4 | Metabolic pathways | map01100 |
| Inositol phosphate metabolism | map00562 |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0032957 | Biological Process | inositol trisphosphate metabolic process |
| GO:0000287 | Molecular Function | magnesium ion binding |
| GO:0005524 | Molecular Function | ATP binding |
| GO:0047325 | Molecular Function | inositol tetrakisphosphate 1-kinase activity |
| GO:0052725 | Molecular Function | inositol-1,3,4-trisphosphate 6-kinase activity |
| GO:0046872 | Molecular Function | metal ion binding |
| GO:0052726 | Molecular Function | inositol-1,3,4-trisphosphate 5-kinase activity |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 27.290 |
| SRR2545915 | Juvenile tuber | 24.690 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 15.390 |
| SRR5643514 | five period of Gastrodia elata | 15.710 | |
| SRR5643515 | five period of Gastrodia elata | 11.700 | |
| SRR5643524 | five period of Gastrodia elata | 15.700 | |
| SRR5643525 | five period of Gastrodia elata | 15.390 | |
| SRR5643528 | five period of Gastrodia elata | 15.920 | |
| SRR5643658 | five period of Gastrodia elata | 11.520 | |
| SRR5643659 | five period of Gastrodia elata | 9.670 | |
| SRR5643660 | five period of Gastrodia elata | 13.150 | |
| SRR5643661 | five period of Gastrodia elata | 12.010 | |
| SRR5643662 | five period of Gastrodia elata | 10.820 | |
| SRR5643663 | five period of Gastrodia elata | 13.560 | |
| SRR5643664 | five period of Gastrodia elata | 9.950 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 11.090 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 12.480 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 13.760 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 16.300 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 19.630 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 15.060 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 14.270 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 13.470 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 16.160 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 15.980 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 17.130 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 17.130 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 21.89 |
| Juven | Juvenile tuber | 20.19 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 33.28 | |
| Mother_Juven | Mother tuber of Juvenile | 40.63 |