Gene detail

Detail information of GWHGAAEX012560/evm.TU.scaffold_44.94

Functional Annotation

Database	Orthologs	E value	Annotation
KOG	KOG1479	4.00E-168	Nucleoside transporter
nr	gi\|695042677\|ref\|XP_009409002.1\|	0	PREDICTED: equilibrative nucleotide transporter 1 [Musa acuminata subsp. malaccensis]
Swissprot	tr\|Q8VXY7\|ENT1_ARATH	1.00E-168	Equilibrative nucleotide transporter 1
trEMBL	tr\|Q4W6L4\|Q4W6L4_ORYSJ	0	Os08g0205200 protein {ECO:0000313\|EMBL:BAF23146.2}
TAIR	AT1G70330	4.00E-168	equilibrative nucleotide transporter 1

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000045	1756532	1760331	+

Transcript Sequence
>GWHTAAEX012560 GGCCTAAGCCCGTATATTTCAAAGAAACCACGTAATACAAAATGAGTTCAGTTTGAAGACATAAAAAGTAAAACAAAATATAACAACAATAGAAATCAGAAATTAAAAAAAATAATAAGATTCTGGATTCAACTCCTCTACTGTGAGGTCTATAAAAGACTAAAGATTTGCTGAGGTATTAATCCTGAAAATCAGTGTAGTAGCAGTATAGTATCAAGGCTATAAAGAAGTAGCGGAATCGATAAATGCCAAACCGACAAATGGGGTCTAGCCGAAAAACCCTCCATATATAAGCCAAACTATGAAGCAAAAAAACAGAGCAGGATTAAAAGACGTCGCGCCCCTACATCAGGCACAAAAAAAATAAATGCAGGGCCAATACCGAAAAATCAAAGTCAAGTCTAAAACCGCAAATTATCACAAATTAAGATTAAGCTTACATATGATCCAGTTTCTAAGCCGTAATCAATATAAACGCCATCTTAATTTTTATGTTTGAGGAGTGGTACTACTAATATCTGTAATTTAATAAAATTTCCAGAAAAGGACAAAAAACATTCTTATGCAAGCGCTCTTCTACCCAGCCGTCCGAAAGCTAATCGTAGTGGAATAATAAGCAGAAAGAAAAGACGAGGGAAAGGGAGAGTGACTTCTTCCAAAAAAAAAGGAAAAGCGATGGGTTTCTTCAACGAAGAGCAGAGCCTCCTCAGGTCGTCGAAATCCTTCACTGCCGGCGATGGGGAGAGCTTGTCTTCGGCTTTTGCCGCTCCCAAGGATCGATTCCGTGTTGCCTACGCCGTCTTCTTCCTTCTCGGAATGGGGTTTCTCCTCCCCTGGAATGCGTTCATCACCGCCGTCGATTATTTCAGCTATCTCTATCCCTCTGCGCCGGTGGATCGCGTCTTCTCCGTTGCTTATATGCTCTCCTGTTTCTTGCCCCTTCTCTTCATCATCGGATTGGCACTTCTTTCGTCCGCAGCTGTTCGGATCAACGTTGGTTTGGTTTTCTTCGCATCCGCTCTGCTCATTCCCCCTGCTCTCGATTTTTTCTATGTTCGAAGCTCCAGAGGGGTTTATGGCGCCTTTGATGCCACCGTCGCCGCAATTTGTCTTGCCGGACTTGGGGACGCACTCGTTCAGGGAGGGGTTATTGGATCTGCCGGAGAGCTGCCGGAGATCTACATGCAGGCTGTCTTTTCCGGAACTGCGGCTTCAGGAGTGCTAGTTTCAGCCATGAGAATCATATGCAAAGCCATTTTCCCGCAAGATGCTGCCGGCTTAAGAAACAGCGCAAACCTATACTTCGCGGTCGCCATATCTGTTATGATTATCTGCATCATATCCTTCAATATGTCCAACAGACTCCCCGTGGTGCTATACTACAAGAACCTCAGAACCCAGGCAATGAAAGAAGAGCAAAATGCGAAATTCCTGCTGACCGGCTCAGCTTGGAGAATGACTCTGTGGAGCATTTTCATCCGGATCAAATGGCACGGCTTTGGGATCTTCCTCATTTACACCGTAACCCTTTCTGTGTTCCCAGGGTACATCACAGAGGACGTGCACTCCGAGGCGCTGAAGGACTGGTACCCCATAATATTGATCTCCGGATACAATATTTTCGATCTCGTCGGGAAGGTTCTGCCCGCCGTCTTCCCCTTCGAGAACGAGGGCGCGGCAGTCGGGTACTGCGCTGCGAGGCTGCTCTTCTACCCCCTGTTCTTCGGATGCATCCACGGCCCTCAGATATTAAGGACGGAAATGCCGGTGATTCTTCTGACATGCCTTCTGGGGCTCACAAATGGGTATCTCACCACTGTTATTATGAGCCTTGCCCCCAAGTCTGTGCCCATACAGCATTCTGAGACTGCAGGAATTATGATGGTGCTGTTCTTAGCTACTGGCTTGGCAGTGGGAGCTATGGTGTCTTGGCTCTGGATGATCTGATAAATCTTCTTAAAAGTCAGATTTTTTTCTTATCTTGAAGAAGTAAAAAAGCTTTAACAAAGCAAATTCAAGAGCTCAGCCACTGAGAGCTACAGCACTATTCTCAAAATTCAGATTTTATTATCATTATAATTTAAGCATTTAGGTTTTAAATTTGCTTCAAATTAGGTTATTTTGTGCTAAGACATATTTATTTGTAAAATGCATTTATAGGGGAGGCTTCTTTTGAATTAGATTAAGGGATTAAATGGATGGATTAAACTAAACAGAATTGTTAAGCTGATCAATTTGAGTTTAAGCTGAATAAATTAAAAGTTGTTTGGTGGCAGCTGAGCTAAGCAACTCTCTATGAAGCTTTTAATAATTAGTTTGGAAAATTTGGATAAGGC

Network for GWHGAAEX012560

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF01733.17	Nucleoside_tran	142	422	5.20E-71

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:1901642	Biological Process	nucleoside transmembrane transport
GO:0005337	Molecular Function	nucleoside transmembrane transporter activity
GO:0016021	Cellular Component	integral component of membrane

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	27.720
SRP064423	SRR2545915	Juvenile tuber	13.130
SRP108465	SRR5643513	five period of Gastrodia elata	36.970
	SRR5643514	five period of Gastrodia elata	39.450
	SRR5643515	five period of Gastrodia elata	39.730
	SRR5643524	five period of Gastrodia elata	38.300
	SRR5643525	five period of Gastrodia elata	58.570
	SRR5643528	five period of Gastrodia elata	62.680
	SRR5643658	five period of Gastrodia elata	61.030
	SRR5643659	five period of Gastrodia elata	23.420
	SRR5643660	five period of Gastrodia elata	30.950
	SRR5643661	five period of Gastrodia elata	25.230
	SRR5643662	five period of Gastrodia elata	23.010
	SRR5643663	five period of Gastrodia elata	24.040
	SRR5643664	five period of Gastrodia elata	17.970
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	41.830
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	51.140
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	37.740
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	46.450
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	39.210
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	44.820
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	40.590
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	35.480
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	42.710
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	43.220
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	38.600
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	38.600
SRP279888	Gastro	Gastrodia elata tuber	21.26
	Juven	Juvenile tuber	41.51
	Mother_Gastro	Mother tuber of Gastrodia elata	44.38
	Mother_Juven	Mother tuber of Juvenile	39.63