Detail information of GWHGAAEX012577/evm.TU.scaffold_44.114


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG22404.00E-45RNA polymerase II general transcription factor BTF3 and related proteins
nrgi|702495591|ref|XP_010037015.1|6.08E-51PREDICTED: transcription factor BTF3 homolog 4 [Eucalyptus grandis]
trEMBLtr|C6SX83|C6SX83_SOYBN3.00E-51Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA11G12170.1}
TAIRAT1G178804.00E-45basic transcription factor 3

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000004521538292160765+
Transcript Sequence

Network for GWHGAAEX012577

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01849.17NAC21561.60E-12
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K01527EGD1, BTF3 Apoptosis - fly map04214

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms39.440
SRR2545915Juvenile tuber46.970
SRP108465SRR5643513five period of Gastrodia elata42.740
SRR5643514five period of Gastrodia elata54.050
SRR5643515five period of Gastrodia elata39.320
SRR5643524five period of Gastrodia elata47.460
SRR5643525five period of Gastrodia elata35.910
SRR5643528five period of Gastrodia elata39.800
SRR5643658five period of Gastrodia elata34.020
SRR5643659five period of Gastrodia elata43.710
SRR5643660five period of Gastrodia elata40.340
SRR5643661five period of Gastrodia elata48.230
SRR5643662five period of Gastrodia elata36.460
SRR5643663five period of Gastrodia elata43.240
SRR5643664five period of Gastrodia elata37.990
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_143.680
SRR6049655Rhizomagastrodiae_C368-T10_good_158.150
SRR6049656Rhizomagastrodiae_C368-T07_good_147.090
SRR6049657Rhizomagastrodiae_C368-T07_good_134.720
SRR6049658Rhizomagastrodiae_C368-T04_good_136.400
SRR6049659Rhizomagastrodiae_C368-T04_good_132.020
SRR6049660Rhizomagastrodiae_C368-T01_good_136.830
SRR6049661Rhizomagastrodiae_C368-T04_good_140.120
SRR6049662Rhizomagastrodiae_C368-T01_good_152.720
SRR6049663Rhizomagastrodiae_C368-T01_good_143.030
SRR6049664Rhizomagastrodiae_C368-T10_good_160.610
SRR6049665Rhizomagastrodiae_C368-T10_good_160.610
SRP279888GastroGastrodia elata tuber 56.52
JuvenJuvenile tuber34.26
Mother_GastroMother tuber of Gastrodia elata 21.63
Mother_JuvenMother tuber of Juvenile 24.38