Detail information of GWHGAAEX012578/evm.TU.scaffold_44.115


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG44389.00E-49Centromere-associated protein NUF2
nrgi|672141551|ref|XP_008794607.1|3.01E-134PREDICTED: kinetochore protein nuf2 [Phoenix dactylifera]
trEMBLtr|A2YRI4|A2YRI4_ORYSI3.00E-100Putative uncharacterized protein {ECO:0000313|EMBL:EAZ05695.1}
TAIRAT1G61000_19.00E-49Unannotated protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000004521611962175596+
Transcript Sequence

Network for GWHGAAEX012578

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03800.13Nuf261448.70E-26
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0031262Cellular ComponentNdc80 complex
GO:0000776Cellular Componentkinetochore

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms7.580
SRR2545915Juvenile tuber7.820
SRP108465SRR5643513five period of Gastrodia elata8.710
SRR5643514five period of Gastrodia elata10.890
SRR5643515five period of Gastrodia elata7.470
SRR5643524five period of Gastrodia elata9.400
SRR5643525five period of Gastrodia elata6.690
SRR5643528five period of Gastrodia elata3.290
SRR5643658five period of Gastrodia elata4.920
SRR5643659five period of Gastrodia elata7.400
SRR5643660five period of Gastrodia elata8.340
SRR5643661five period of Gastrodia elata9.300
SRR5643662five period of Gastrodia elata7.870
SRR5643663five period of Gastrodia elata7.880
SRR5643664five period of Gastrodia elata7.700
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_18.090
SRR6049655Rhizomagastrodiae_C368-T10_good_111.880
SRR6049656Rhizomagastrodiae_C368-T07_good_19.260
SRR6049657Rhizomagastrodiae_C368-T07_good_17.560
SRR6049658Rhizomagastrodiae_C368-T04_good_19.250
SRR6049659Rhizomagastrodiae_C368-T04_good_16.280
SRR6049660Rhizomagastrodiae_C368-T01_good_19.170
SRR6049661Rhizomagastrodiae_C368-T04_good_18.610
SRR6049662Rhizomagastrodiae_C368-T01_good_112.620
SRR6049663Rhizomagastrodiae_C368-T01_good_111.620
SRR6049664Rhizomagastrodiae_C368-T10_good_111.450
SRR6049665Rhizomagastrodiae_C368-T10_good_111.450
SRP279888GastroGastrodia elata tuber 14.05
JuvenJuvenile tuber16.00
Mother_GastroMother tuber of Gastrodia elata 10.50
Mother_JuvenMother tuber of Juvenile 14.41