Detail information of GWHGAAEX012579/evm.TU.scaffold_44.116
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|108760510|ref|YP_632759.1| | 4.00E-25 | serine/threonine-protein kinase PKN1 [Myxococcus xanthus DK 1622] |
| nr | gi|731409514|ref|XP_010657225.1| | 0 | PREDICTED: chitin elicitor receptor kinase 1-like [Vitis vinifera] |
| Swissprot | tr|A8R7E6|CERK1_ARATH | 0 | Chitin elicitor receptor kinase 1 (Precursor) |
| trEMBL | tr|D7TEC1|D7TEC1_VITVI | 0 | Putative uncharacterized protein {ECO:0000313|EMBL:CBI28844.3} |
| TAIR | AT3G21630 | 0 | chitin elicitor receptor kinase 1 |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000045 | 2234436 | 2247058 | + |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX012579
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00069.24 | Pkinase | 313 | 579 | 2.10E-45 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| Protein Kinases Family | RLK-Pelle_LysM |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| K13429 | CERK1 | Plant-pathogen interaction | map04626 |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0006468 | Biological Process | protein phosphorylation |
| GO:0004672 | Molecular Function | protein kinase activity |
| GO:0005524 | Molecular Function | ATP binding |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 14.350 |
| SRR2545915 | Juvenile tuber | 12.520 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 8.480 |
| SRR5643514 | five period of Gastrodia elata | 9.090 | |
| SRR5643515 | five period of Gastrodia elata | 7.550 | |
| SRR5643524 | five period of Gastrodia elata | 8.380 | |
| SRR5643525 | five period of Gastrodia elata | 11.300 | |
| SRR5643528 | five period of Gastrodia elata | 10.550 | |
| SRR5643658 | five period of Gastrodia elata | 11.100 | |
| SRR5643659 | five period of Gastrodia elata | 10.860 | |
| SRR5643660 | five period of Gastrodia elata | 11.460 | |
| SRR5643661 | five period of Gastrodia elata | 10.030 | |
| SRR5643662 | five period of Gastrodia elata | 12.050 | |
| SRR5643663 | five period of Gastrodia elata | 10.500 | |
| SRR5643664 | five period of Gastrodia elata | 11.560 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 9.700 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 10.170 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 11.040 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 11.150 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 11.150 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 12.620 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 12.770 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 11.620 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 10.100 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 13.230 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 9.790 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 9.790 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 14.79 |
| Juven | Juvenile tuber | 10.20 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 17.02 | |
| Mother_Juven | Mother tuber of Juvenile | 11.18 |