Detail information of GWHGAAEX012588/evm.TU.scaffold_44.125


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|662556524|gb|AIE56161.1|0inducer of CBF expression 1 [Phalaenopsis aphrodite]
Swissprottr|Q9LSE2|ICE1_ARATH2.00E-118Transcription factor ICE1
trEMBLtr|A0A075F527|A0A075F527_9ASPA0Inducer of CBF expression 1 {ECO:0000313|EMBL:AIE56161.1}
TAIRAT3G267441.00E-105basic helix-loop-helix (bHLH) DNA-binding superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000004523540682360516-
Transcript Sequence

Network for GWHGAAEX012588

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00010.25HLH2993422.40E-09
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilybHLH

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0046983Molecular Functionprotein dimerization activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms15.180
SRR2545915Juvenile tuber41.170
SRP108465SRR5643513five period of Gastrodia elata22.650
SRR5643514five period of Gastrodia elata20.420
SRR5643515five period of Gastrodia elata25.260
SRR5643524five period of Gastrodia elata20.200
SRR5643525five period of Gastrodia elata3.230
SRR5643528five period of Gastrodia elata2.980
SRR5643658five period of Gastrodia elata3.990
SRR5643659five period of Gastrodia elata30.800
SRR5643660five period of Gastrodia elata34.150
SRR5643661five period of Gastrodia elata31.380
SRR5643662five period of Gastrodia elata25.170
SRR5643663five period of Gastrodia elata33.670
SRR5643664five period of Gastrodia elata28.060
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_122.560
SRR6049655Rhizomagastrodiae_C368-T10_good_119.300
SRR6049656Rhizomagastrodiae_C368-T07_good_123.300
SRR6049657Rhizomagastrodiae_C368-T07_good_121.990
SRR6049658Rhizomagastrodiae_C368-T04_good_114.130
SRR6049659Rhizomagastrodiae_C368-T04_good_18.040
SRR6049660Rhizomagastrodiae_C368-T01_good_120.340
SRR6049661Rhizomagastrodiae_C368-T04_good_118.980
SRR6049662Rhizomagastrodiae_C368-T01_good_122.200
SRR6049663Rhizomagastrodiae_C368-T01_good_115.600
SRR6049664Rhizomagastrodiae_C368-T10_good_113.600
SRR6049665Rhizomagastrodiae_C368-T10_good_113.600
SRP279888GastroGastrodia elata tuber 16.90
JuvenJuvenile tuber18.35
Mother_GastroMother tuber of Gastrodia elata 1.64
Mother_JuvenMother tuber of Juvenile 7.35