Detail information of GWHGAAEX012594/evm.TU.scaffold_44.130


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|221640455|ref|YP_002526717.1|4.00E-127dihydrolipoamide succinyltransferase [Rhodobacter sphaeroides KD131]
KOGKOG05590Dihydrolipoamide succinyltransferase (2-oxoglutarate dehydrogenase, E2 subunit)
nrgi|743863229|ref|XP_010943742.1|0PREDICTED: dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex 1, mitochondrial-like isoform X1 [Elaeis guineensis]
Swissprottr|Q8H107|ODO2B_ARATH0Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex 2, mitochondrial (Precursor)
trEMBLtr|M0TWH6|M0TWH6_MUSAM0Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr9P01190_001}
TAIRAT5G550700Dihydrolipoamide succinyltransferase

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000004525979192604959-
Transcript Sequence

Network for GWHGAAEX012594

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00364.21Biotin_lipoyl771451.30E-17
PF00198.222-oxoacid_dh2184461.20E-77
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
K00658DLST, sucB Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Microbial metabolism in diverse environmentsmap01120
Biosynthesis of antibioticsmap01130
Carbon metabolismmap01200
Citrate cycle (TCA cycle)map00020
Lysine degradationmap00310
Tryptophan metabolismmap00380

Gene Ontology

GO term OntologyName
GO:0006099Biological Processtricarboxylic acid cycle
GO:0004149Molecular Functiondihydrolipoyllysine-residue succinyltransferase activity
GO:0016746Molecular Functiontransferase activity, transferring acyl groups
GO:0045252Cellular Componentoxoglutarate dehydrogenase complex

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms199.460
SRR2545915Juvenile tuber254.510
SRP108465SRR5643513five period of Gastrodia elata168.190
SRR5643514five period of Gastrodia elata200.650
SRR5643515five period of Gastrodia elata161.360
SRR5643524five period of Gastrodia elata204.390
SRR5643525five period of Gastrodia elata159.410
SRR5643528five period of Gastrodia elata172.190
SRR5643658five period of Gastrodia elata155.010
SRR5643659five period of Gastrodia elata201.110
SRR5643660five period of Gastrodia elata197.700
SRR5643661five period of Gastrodia elata173.230
SRR5643662five period of Gastrodia elata211.920
SRR5643663five period of Gastrodia elata213.060
SRR5643664five period of Gastrodia elata222.880
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1165.230
SRR6049655Rhizomagastrodiae_C368-T10_good_1211.180
SRR6049656Rhizomagastrodiae_C368-T07_good_1188.330
SRR6049657Rhizomagastrodiae_C368-T07_good_1158.870
SRR6049658Rhizomagastrodiae_C368-T04_good_1151.170
SRR6049659Rhizomagastrodiae_C368-T04_good_1146.240
SRR6049660Rhizomagastrodiae_C368-T01_good_1136.820
SRR6049661Rhizomagastrodiae_C368-T04_good_1145.960
SRR6049662Rhizomagastrodiae_C368-T01_good_1176.670
SRR6049663Rhizomagastrodiae_C368-T01_good_1160.620
SRR6049664Rhizomagastrodiae_C368-T10_good_1224.560
SRR6049665Rhizomagastrodiae_C368-T10_good_1224.560
SRP279888GastroGastrodia elata tuber 228.38
JuvenJuvenile tuber179.34
Mother_GastroMother tuber of Gastrodia elata 133.36
Mother_JuvenMother tuber of Juvenile 163.68