Detail information of GWHGAAEX012602/evm.TU.scaffold_44.138


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG06545.00E-132G2/Mitotic-specific cyclin A
nrgi|743774565|ref|XP_010917639.1|7.95E-170PREDICTED: cyclin-A2-1-like [Elaeis guineensis]
Swissprottr|Q2QQ96|CCA21_ORYSJ1.00E-150Cyclin-A2-1
trEMBLtr|A0A067KQB6|A0A067KQB6_JATCU5.00E-153Uncharacterized protein {ECO:0000313|EMBL:KDP37173.1}
TAIRAT1G803705.00E-132Cyclin A2;4

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000004529124422924457+
Transcript Sequence

Network for GWHGAAEX012602

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00134.22Cyclin_N2173436.90E-42
PF02984.18Cyclin_C3464681.30E-31
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K06627CCNA AMPK signaling pathway map04152
Cell cyclemap04110
Cellular senescencemap04218
Progesterone-mediated oocyte maturationmap04914

Gene Ontology

GO term OntologyName
GO:0005634Cellular Componentnucleus

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms15.630
SRR2545915Juvenile tuber13.580
SRP108465SRR5643513five period of Gastrodia elata8.840
SRR5643514five period of Gastrodia elata9.110
SRR5643515five period of Gastrodia elata11.470
SRR5643524five period of Gastrodia elata9.480
SRR5643525five period of Gastrodia elata9.300
SRR5643528five period of Gastrodia elata12.430
SRR5643658five period of Gastrodia elata11.290
SRR5643659five period of Gastrodia elata10.020
SRR5643660five period of Gastrodia elata9.060
SRR5643661five period of Gastrodia elata7.650
SRR5643662five period of Gastrodia elata7.150
SRR5643663five period of Gastrodia elata8.510
SRR5643664five period of Gastrodia elata8.500
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_17.990
SRR6049655Rhizomagastrodiae_C368-T10_good_119.190
SRR6049656Rhizomagastrodiae_C368-T07_good_19.910
SRR6049657Rhizomagastrodiae_C368-T07_good_19.930
SRR6049658Rhizomagastrodiae_C368-T04_good_110.060
SRR6049659Rhizomagastrodiae_C368-T04_good_18.200
SRR6049660Rhizomagastrodiae_C368-T01_good_111.170
SRR6049661Rhizomagastrodiae_C368-T04_good_110.460
SRR6049662Rhizomagastrodiae_C368-T01_good_111.980
SRR6049663Rhizomagastrodiae_C368-T01_good_110.730
SRR6049664Rhizomagastrodiae_C368-T10_good_113.230
SRR6049665Rhizomagastrodiae_C368-T10_good_113.230
SRP279888GastroGastrodia elata tuber 9.44
JuvenJuvenile tuber7.37
Mother_GastroMother tuber of Gastrodia elata 12.07
Mother_JuvenMother tuber of Juvenile 8.86