Detail information of GWHGAAEX012605/evm.TU.scaffold_44.141


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|590659105|ref|XP_007035036.1|4.79E-22C2H2 and C2HC zinc fingers superfamily protein, putative [Theobroma cacao]
Swissprottr|Q9SR34|TAC1_ARATH4.00E-13Transcriptional regulator TAC1
trEMBLtr|A0A061ENL3|A0A061ENL3_THECC2.00E-22C2H2 and C2HC zinc fingers superfamily protein, putative {ECO:0000313|EMBL:EOY05962.1}
TAIRAT5G435402.00E-13C2H2 and C2HC zinc fingers superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000004530086743010073-
Transcript Sequence

Network for GWHGAAEX012605

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName
GO:0003676Molecular Functionnucleic acid binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms0.000
SRR2545915Juvenile tuber0.000
SRP108465SRR5643513five period of Gastrodia elata2.630
SRR5643514five period of Gastrodia elata5.290
SRR5643515five period of Gastrodia elata4.630
SRR5643524five period of Gastrodia elata6.720
SRR5643525five period of Gastrodia elata0.150
SRR5643528five period of Gastrodia elata0.300
SRR5643658five period of Gastrodia elata0.110
SRR5643659five period of Gastrodia elata0.000
SRR5643660five period of Gastrodia elata0.000
SRR5643661five period of Gastrodia elata0.000
SRR5643662five period of Gastrodia elata0.000
SRR5643663five period of Gastrodia elata0.000
SRR5643664five period of Gastrodia elata0.000
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_15.370
SRR6049655Rhizomagastrodiae_C368-T10_good_113.740
SRR6049656Rhizomagastrodiae_C368-T07_good_110.670
SRR6049657Rhizomagastrodiae_C368-T07_good_12.500
SRR6049658Rhizomagastrodiae_C368-T04_good_14.080
SRR6049659Rhizomagastrodiae_C368-T04_good_15.570
SRR6049660Rhizomagastrodiae_C368-T01_good_10.690
SRR6049661Rhizomagastrodiae_C368-T04_good_13.400
SRR6049662Rhizomagastrodiae_C368-T01_good_14.780
SRR6049663Rhizomagastrodiae_C368-T01_good_16.070
SRR6049664Rhizomagastrodiae_C368-T10_good_110.420
SRR6049665Rhizomagastrodiae_C368-T10_good_110.420
SRP279888GastroGastrodia elata tuber 0.00
JuvenJuvenile tuber0.16
Mother_GastroMother tuber of Gastrodia elata 58.87
Mother_JuvenMother tuber of Juvenile 21.05