Detail information of GWHGAAEX012627/evm.TU.scaffold_44.169


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|29347571|ref|NP_811074.1|4.00E-0850S ribosomal protein L9 [Bacteroides thetaiotaomicron VPI-5482]
KOGKOG46071.00E-22Mitochondrial ribosomal protein L9
nrgi|15230544|ref|NP_190075.1|9.29E-2150S ribosomal protein L9 [Arabidopsis thaliana]
Swissprottr|P25864|RK9_ARATH4.00E-2350S ribosomal protein L9, chloroplastic (Precursor)
trEMBLtr|A0A067F2G6|A0A067F2G6_CITSI9.00E-21Uncharacterized protein {ECO:0000313|EMBL:KDO60290.1}
TAIRAT3G448901.00E-22ribosomal protein L9

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000004537776413778080+
Transcript Sequence

Network for GWHGAAEX012627

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module3

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01281.18Ribosomal_L9_N731153.20E-16
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K02939RP-L9, MRPL9, rplI Ribosome map03010

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms44.480
SRR2545915Juvenile tuber41.000
SRP108465SRR5643513five period of Gastrodia elata32.760
SRR5643514five period of Gastrodia elata47.770
SRR5643515five period of Gastrodia elata38.440
SRR5643524five period of Gastrodia elata35.890
SRR5643525five period of Gastrodia elata22.700
SRR5643528five period of Gastrodia elata16.130
SRR5643658five period of Gastrodia elata21.620
SRR5643659five period of Gastrodia elata45.030
SRR5643660five period of Gastrodia elata60.600
SRR5643661five period of Gastrodia elata58.490
SRR5643662five period of Gastrodia elata70.150
SRR5643663five period of Gastrodia elata53.340
SRR5643664five period of Gastrodia elata77.870
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_119.210
SRR6049655Rhizomagastrodiae_C368-T10_good_123.990
SRR6049656Rhizomagastrodiae_C368-T07_good_128.200
SRR6049657Rhizomagastrodiae_C368-T07_good_122.390
SRR6049658Rhizomagastrodiae_C368-T04_good_110.410
SRR6049659Rhizomagastrodiae_C368-T04_good_118.320
SRR6049660Rhizomagastrodiae_C368-T01_good_121.920
SRR6049661Rhizomagastrodiae_C368-T04_good_113.430
SRR6049662Rhizomagastrodiae_C368-T01_good_118.830
SRR6049663Rhizomagastrodiae_C368-T01_good_118.900
SRR6049664Rhizomagastrodiae_C368-T10_good_133.510
SRR6049665Rhizomagastrodiae_C368-T10_good_133.510
SRP279888GastroGastrodia elata tuber 56.77
JuvenJuvenile tuber25.44
Mother_GastroMother tuber of Gastrodia elata 29.61
Mother_JuvenMother tuber of Juvenile 17.27