Detail information of GWHGAAEX012628/evm.TU.scaffold_44.171


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|428306563|ref|YP_007143388.1|4.00E-1650S ribosomal protein L9 [Crinalium epipsammum PCC 9333]
KOGKOG46071.00E-34Mitochondrial ribosomal protein L9
nrgi|351724247|ref|NP_001237307.1|2.49E-36uncharacterized protein LOC100500390 [Glycine max]
Swissprottr|P25864|RK9_ARATH3.00E-3550S ribosomal protein L9, chloroplastic (Precursor)
trEMBLtr|C6T1L0|C6T1L0_SOYBN9.00E-37Putative uncharacterized protein {ECO:0000313|EMBL:ACU15460.1}
TAIRAT3G448901.00E-34ribosomal protein L9

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000004538065173822572+
Transcript Sequence

Network for GWHGAAEX012628

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module3

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03948.13Ribosomal_L9_C931751.10E-16
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K02939RP-L9, MRPL9, rplI Ribosome map03010

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms8.500
SRR2545915Juvenile tuber6.260
SRP108465SRR5643513five period of Gastrodia elata3.780
SRR5643514five period of Gastrodia elata4.340
SRR5643515five period of Gastrodia elata3.950
SRR5643524five period of Gastrodia elata3.130
SRR5643525five period of Gastrodia elata1.140
SRR5643528five period of Gastrodia elata2.110
SRR5643658five period of Gastrodia elata2.970
SRR5643659five period of Gastrodia elata3.670
SRR5643660five period of Gastrodia elata4.930
SRR5643661five period of Gastrodia elata4.550
SRR5643662five period of Gastrodia elata6.040
SRR5643663five period of Gastrodia elata5.370
SRR5643664five period of Gastrodia elata7.650
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_13.170
SRR6049655Rhizomagastrodiae_C368-T10_good_12.610
SRR6049656Rhizomagastrodiae_C368-T07_good_12.860
SRR6049657Rhizomagastrodiae_C368-T07_good_12.310
SRR6049658Rhizomagastrodiae_C368-T04_good_12.370
SRR6049659Rhizomagastrodiae_C368-T04_good_10.970
SRR6049660Rhizomagastrodiae_C368-T01_good_11.820
SRR6049661Rhizomagastrodiae_C368-T04_good_10.770
SRR6049662Rhizomagastrodiae_C368-T01_good_11.950
SRR6049663Rhizomagastrodiae_C368-T01_good_11.660
SRR6049664Rhizomagastrodiae_C368-T10_good_12.170
SRR6049665Rhizomagastrodiae_C368-T10_good_12.170
SRP279888GastroGastrodia elata tuber 3.69
JuvenJuvenile tuber0.81
Mother_GastroMother tuber of Gastrodia elata 1.27
Mother_JuvenMother tuber of Juvenile 0.93