Detail information of GWHGAAEX012629/evm.TU.scaffold_44.172


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG17213.00E-31FOG: Zn-finger
nrgi|672162781|ref|XP_008801217.1|7.07E-38PREDICTED: zinc finger protein ZAT5-like [Phoenix dactylifera]
Swissprottr|Q9SLD4|ZAT11_ARATH8.00E-32Zinc finger protein ZAT11
trEMBLtr|W1NY00|W1NY00_AMBTC1.00E-33Uncharacterized protein {ECO:0000313|EMBL:ERN00533.1}
TAIRAT2G374303.00E-31C2H2 and C2HC zinc fingers superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000004538265113827193+
Transcript Sequence

Network for GWHGAAEX012629

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF13912.5zf-C2H2_660844.30E-14
PF13912.5zf-C2H2_61041289.00E-11
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyC2H2

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0003676Molecular Functionnucleic acid binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms0.970
SRR2545915Juvenile tuber2.970
SRP108465SRR5643513five period of Gastrodia elata1.980
SRR5643514five period of Gastrodia elata3.210
SRR5643515five period of Gastrodia elata0.990
SRR5643524five period of Gastrodia elata4.110
SRR5643525five period of Gastrodia elata15.340
SRR5643528five period of Gastrodia elata41.650
SRR5643658five period of Gastrodia elata12.330
SRR5643659five period of Gastrodia elata0.000
SRR5643660five period of Gastrodia elata0.270
SRR5643661five period of Gastrodia elata0.140
SRR5643662five period of Gastrodia elata0.000
SRR5643663five period of Gastrodia elata0.000
SRR5643664five period of Gastrodia elata0.000
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_12.590
SRR6049655Rhizomagastrodiae_C368-T10_good_11.980
SRR6049656Rhizomagastrodiae_C368-T07_good_13.120
SRR6049657Rhizomagastrodiae_C368-T07_good_13.370
SRR6049658Rhizomagastrodiae_C368-T04_good_12.880
SRR6049659Rhizomagastrodiae_C368-T04_good_12.910
SRR6049660Rhizomagastrodiae_C368-T01_good_12.770
SRR6049661Rhizomagastrodiae_C368-T04_good_15.910
SRR6049662Rhizomagastrodiae_C368-T01_good_12.330
SRR6049663Rhizomagastrodiae_C368-T01_good_11.970
SRR6049664Rhizomagastrodiae_C368-T10_good_12.110
SRR6049665Rhizomagastrodiae_C368-T10_good_12.110
SRP279888GastroGastrodia elata tuber 0.33
JuvenJuvenile tuber0.26
Mother_GastroMother tuber of Gastrodia elata 82.10
Mother_JuvenMother tuber of Juvenile 53.94