Detail information of GWHGAAEX012634/evm.TU.scaffold_44.178


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG05954.00E-13Serine/threonine-protein kinase involved in autophagy
nrgi|672124792|ref|XP_008785793.1|1.43E-28PREDICTED: serine/threonine-protein kinase ULK3 [Phoenix dactylifera]
trEMBLtr|J3M2V8|J3M2V8_ORYBR4.00E-24Uncharacterized protein {ECO:0000313|EnsemblPlants:OB04G37330.1}
TAIRAT1G49180_14.00E-13Unannotated protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000004539075543907871+
Transcript Sequence

Network for GWHGAAEX012634

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module6

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00069.24Pkinase22907.30E-07
Protein Sequence

Gene family

Gene familysubfamily
Protein Kinases FamilyGroup-Pl-3

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006468Biological Processprotein phosphorylation
GO:0004672Molecular Functionprotein kinase activity
GO:0005524Molecular FunctionATP binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms5.000
SRR2545915Juvenile tuber3.970
SRP108465SRR5643513five period of Gastrodia elata5.090
SRR5643514five period of Gastrodia elata8.080
SRR5643515five period of Gastrodia elata6.030
SRR5643524five period of Gastrodia elata5.580
SRR5643525five period of Gastrodia elata16.230
SRR5643528five period of Gastrodia elata11.400
SRR5643658five period of Gastrodia elata15.630
SRR5643659five period of Gastrodia elata5.650
SRR5643660five period of Gastrodia elata9.080
SRR5643661five period of Gastrodia elata7.030
SRR5643662five period of Gastrodia elata8.280
SRR5643663five period of Gastrodia elata10.280
SRR5643664five period of Gastrodia elata10.260
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_126.090
SRR6049655Rhizomagastrodiae_C368-T10_good_112.010
SRR6049656Rhizomagastrodiae_C368-T07_good_119.770
SRR6049657Rhizomagastrodiae_C368-T07_good_127.130
SRR6049658Rhizomagastrodiae_C368-T04_good_132.970
SRR6049659Rhizomagastrodiae_C368-T04_good_121.890
SRR6049660Rhizomagastrodiae_C368-T01_good_123.200
SRR6049661Rhizomagastrodiae_C368-T04_good_127.520
SRR6049662Rhizomagastrodiae_C368-T01_good_128.650
SRR6049663Rhizomagastrodiae_C368-T01_good_135.020
SRR6049664Rhizomagastrodiae_C368-T10_good_112.680
SRR6049665Rhizomagastrodiae_C368-T10_good_112.680
SRP279888GastroGastrodia elata tuber 21.30
JuvenJuvenile tuber1.02
Mother_GastroMother tuber of Gastrodia elata 6.90
Mother_JuvenMother tuber of Juvenile 6.01