Detail information of GWHGAAEX012643/evm.TU.scaffold_44.189


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|387127421|ref|YP_006296026.1|2.00E-18Heat shock protein Hsp20 [Methylophaga nitratireducenticrescens]
KOGKOG07102.00E-51Molecular chaperone (small heat-shock protein Hsp26/Hsp42)
nrgi|672138993|ref|XP_008793269.1|1.52E-70PREDICTED: 17.3 kDa class II heat shock protein-like [Phoenix dactylifera]
Swissprottr|P05477|HSP21_SOYBN3.00E-5917.9 kDa class II heat shock protein
trEMBLtr|A4ZF53|A4ZF53_AGATE2.00E-70Chaperone {ECO:0000313|EMBL:ABF61870.1}
TAIRAT5G120202.00E-5117.6 kDa class II heat shock protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000004542456164246606-
Transcript Sequence

Network for GWHGAAEX012643

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module1

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00011.20HSP20521604.80E-26
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K13993HSP20 Protein processing in endoplasmic reticulum map04141

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms151.670
SRR2545915Juvenile tuber2904.160
SRP108465SRR5643513five period of Gastrodia elata131.280
SRR5643514five period of Gastrodia elata109.940
SRR5643515five period of Gastrodia elata223.560
SRR5643524five period of Gastrodia elata77.300
SRR5643525five period of Gastrodia elata2396.040
SRR5643528five period of Gastrodia elata3793.180
SRR5643658five period of Gastrodia elata373.680
SRR5643659five period of Gastrodia elata127.540
SRR5643660five period of Gastrodia elata104.650
SRR5643661five period of Gastrodia elata116.100
SRR5643662five period of Gastrodia elata133.680
SRR5643663five period of Gastrodia elata132.860
SRR5643664five period of Gastrodia elata91.290
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1214.550
SRR6049655Rhizomagastrodiae_C368-T10_good_183.930
SRR6049656Rhizomagastrodiae_C368-T07_good_1102.470
SRR6049657Rhizomagastrodiae_C368-T07_good_1118.480
SRR6049658Rhizomagastrodiae_C368-T04_good_164.060
SRR6049659Rhizomagastrodiae_C368-T04_good_166.250
SRR6049660Rhizomagastrodiae_C368-T01_good_149.480
SRR6049661Rhizomagastrodiae_C368-T04_good_197.710
SRR6049662Rhizomagastrodiae_C368-T01_good_176.460
SRR6049663Rhizomagastrodiae_C368-T01_good_147.550
SRR6049664Rhizomagastrodiae_C368-T10_good_184.670
SRR6049665Rhizomagastrodiae_C368-T10_good_184.670
SRP279888GastroGastrodia elata tuber 158.26
JuvenJuvenile tuber184.25
Mother_GastroMother tuber of Gastrodia elata 261.47
Mother_JuvenMother tuber of Juvenile 76.74