Detail information of GWHGAAEX012644/evm.TU.scaffold_44.190


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|22298854|ref|NP_682101.1|1.00E-113acetyl-CoA carboxylase carboxyltransferase subunit alpha [Thermosynechococcus elongatus BP-1]
nrgi|672173447|ref|XP_008806855.1|0PREDICTED: acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha, chloroplastic-like [Phoenix dactylifera]
Swissprottr|Q9LD43|ACCA_ARATH0Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha, chloroplastic (Precursor)
trEMBLtr|F6I6I9|F6I6I9_VITVI0Putative uncharacterized protein {ECO:0000313|EMBL:CCB62382.1}
TAIRAT2G380400acetyl Co-enzyme a carboxylase carboxyltransferase alpha subunit

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000004542480154274608-
Transcript Sequence

Network for GWHGAAEX012644

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03255.13ACCA1082503.10E-54
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K01962accA Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Microbial metabolism in diverse environmentsmap01120
Biosynthesis of antibioticsmap01130
Carbon metabolismmap01200
Fatty acid metabolismmap01212
Pyruvate metabolismmap00620
Propanoate metabolismmap00640
Carbon fixation pathways in prokaryotesmap00720
Fatty acid biosynthesismap00061

Gene Ontology

GO term OntologyName
GO:0006633Biological Processfatty acid biosynthetic process
GO:0016874Molecular Functionligase activity
GO:0003989Molecular Functionacetyl-CoA carboxylase activity
GO:0009317Cellular Componentacetyl-CoA carboxylase complex

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms59.060
SRR2545915Juvenile tuber66.120
SRP108465SRR5643513five period of Gastrodia elata99.500
SRR5643514five period of Gastrodia elata101.730
SRR5643515five period of Gastrodia elata89.890
SRR5643524five period of Gastrodia elata93.850
SRR5643525five period of Gastrodia elata68.560
SRR5643528five period of Gastrodia elata67.850
SRR5643658five period of Gastrodia elata69.140
SRR5643659five period of Gastrodia elata77.940
SRR5643660five period of Gastrodia elata78.200
SRR5643661five period of Gastrodia elata82.390
SRR5643662five period of Gastrodia elata88.700
SRR5643663five period of Gastrodia elata87.900
SRR5643664five period of Gastrodia elata87.950
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1103.420
SRR6049655Rhizomagastrodiae_C368-T10_good_1102.370
SRR6049656Rhizomagastrodiae_C368-T07_good_1103.070
SRR6049657Rhizomagastrodiae_C368-T07_good_1106.660
SRR6049658Rhizomagastrodiae_C368-T04_good_187.330
SRR6049659Rhizomagastrodiae_C368-T04_good_197.970
SRR6049660Rhizomagastrodiae_C368-T01_good_192.880
SRR6049661Rhizomagastrodiae_C368-T04_good_186.670
SRR6049662Rhizomagastrodiae_C368-T01_good_189.730
SRR6049663Rhizomagastrodiae_C368-T01_good_185.660
SRR6049664Rhizomagastrodiae_C368-T10_good_1112.900
SRR6049665Rhizomagastrodiae_C368-T10_good_1112.900
SRP279888GastroGastrodia elata tuber 68.33
JuvenJuvenile tuber104.66
Mother_GastroMother tuber of Gastrodia elata 107.20
Mother_JuvenMother tuber of Juvenile 112.19