Detail information of GWHGAAEX012653/evm.TU.scaffold_44.203


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|695026035|ref|XP_009400291.1|4.61E-31PREDICTED: dof zinc finger protein DOF1.7-like [Musa acuminata subsp. malaccensis]
Swissprottr|Q84K52|DOF47_ARATH6.00E-28Dof zinc finger protein DOF4.7
trEMBLtr|M0SXT0|M0SXT0_MUSAM5.00E-31Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr5P12010_001}
TAIRAT4G380002.00E-27DNA binding with one finger 4.7

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000004547276514729385-
Transcript Sequence

Network for GWHGAAEX012653

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module1

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02701.14zf-Dof37915.60E-30
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyC2C2-Dof

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms21.700
SRR2545915Juvenile tuber69.780
SRP108465SRR5643513five period of Gastrodia elata52.700
SRR5643514five period of Gastrodia elata47.000
SRR5643515five period of Gastrodia elata71.370
SRR5643524five period of Gastrodia elata33.680
SRR5643525five period of Gastrodia elata156.020
SRR5643528five period of Gastrodia elata290.330
SRR5643658five period of Gastrodia elata186.580
SRR5643659five period of Gastrodia elata77.540
SRR5643660five period of Gastrodia elata82.080
SRR5643661five period of Gastrodia elata99.960
SRR5643662five period of Gastrodia elata182.140
SRR5643663five period of Gastrodia elata84.780
SRR5643664five period of Gastrodia elata29.150
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_140.550
SRR6049655Rhizomagastrodiae_C368-T10_good_135.510
SRR6049656Rhizomagastrodiae_C368-T07_good_154.770
SRR6049657Rhizomagastrodiae_C368-T07_good_119.550
SRR6049658Rhizomagastrodiae_C368-T04_good_122.460
SRR6049659Rhizomagastrodiae_C368-T04_good_116.650
SRR6049660Rhizomagastrodiae_C368-T01_good_122.550
SRR6049661Rhizomagastrodiae_C368-T04_good_119.060
SRR6049662Rhizomagastrodiae_C368-T01_good_180.060
SRR6049663Rhizomagastrodiae_C368-T01_good_172.970
SRR6049664Rhizomagastrodiae_C368-T10_good_188.180
SRR6049665Rhizomagastrodiae_C368-T10_good_188.180
SRP279888GastroGastrodia elata tuber 15.49
JuvenJuvenile tuber14.30
Mother_GastroMother tuber of Gastrodia elata 69.81
Mother_JuvenMother tuber of Juvenile 11.79