Detail information of GWHGAAEX012663/evm.TU.scaffold_44.214
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| nr | gi|695040507|ref|XP_009407832.1| | 7.74E-64 | PREDICTED: probable WRKY transcription factor 12 [Musa acuminata subsp. malaccensis] |
| Swissprot | tr|Q93WY4|WRK12_ARATH | 1.00E-55 | Probable WRKY transcription factor 12 |
| trEMBL | tr|M0SPV2|M0SPV2_MUSAM | 3.00E-61 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr4P17890_001} |
| TAIR | AT4G39410 | 1.00E-42 | WRKY DNA-binding protein 13 |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000045 | 5096256 | 5165061 | - |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX012663
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|---|
| Module1 |
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF03106.14 | WRKY | 133 | 189 | 2.10E-25 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | WRKY |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| -- | -- | -- | -- |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 1.100 |
| SRR2545915 | Juvenile tuber | 0.740 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 0.940 |
| SRR5643514 | five period of Gastrodia elata | 6.740 | |
| SRR5643515 | five period of Gastrodia elata | 2.090 | |
| SRR5643524 | five period of Gastrodia elata | 2.910 | |
| SRR5643525 | five period of Gastrodia elata | 36.700 | |
| SRR5643528 | five period of Gastrodia elata | 23.180 | |
| SRR5643658 | five period of Gastrodia elata | 79.680 | |
| SRR5643659 | five period of Gastrodia elata | 0.580 | |
| SRR5643660 | five period of Gastrodia elata | 0.320 | |
| SRR5643661 | five period of Gastrodia elata | 0.530 | |
| SRR5643662 | five period of Gastrodia elata | 1.690 | |
| SRR5643663 | five period of Gastrodia elata | 8.830 | |
| SRR5643664 | five period of Gastrodia elata | 5.460 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 2.590 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 2.850 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 2.600 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 2.610 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 3.730 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 1.830 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 2.090 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 3.570 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 7.200 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 3.300 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 3.120 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 3.120 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 22.27 |
| Juven | Juvenile tuber | 0.43 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 1.54 | |
| Mother_Juven | Mother tuber of Juvenile | 0.32 |