Detail information of GWHGAAEX012672/evm.TU.scaffold_44.229


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG08394.00E-110RNA Methylase, SpoU family
nrgi|743778898|ref|XP_010919913.1|3.19E-159PREDICTED: uncharacterized protein LOC105043884 [Elaeis guineensis]
trEMBLtr|M0Z5F1|M0Z5F1_HORVD5.00E-153Uncharacterized protein {ECO:0000313|EnsemblPlants:MLOC_77447.4}
TAIRAT4G176104.00E-110tRNA/rRNA methyltransferase (SpoU) family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000004554003335432006-
Transcript Sequence

Network for GWHGAAEX012672

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms18.020
SRR2545915Juvenile tuber16.840
SRP108465SRR5643513five period of Gastrodia elata7.540
SRR5643514five period of Gastrodia elata6.610
SRR5643515five period of Gastrodia elata6.670
SRR5643524five period of Gastrodia elata5.980
SRR5643525five period of Gastrodia elata5.950
SRR5643528five period of Gastrodia elata4.470
SRR5643658five period of Gastrodia elata6.130
SRR5643659five period of Gastrodia elata10.790
SRR5643660five period of Gastrodia elata12.100
SRR5643661five period of Gastrodia elata10.430
SRR5643662five period of Gastrodia elata13.620
SRR5643663five period of Gastrodia elata14.050
SRR5643664five period of Gastrodia elata13.120
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_19.220
SRR6049655Rhizomagastrodiae_C368-T10_good_13.120
SRR6049656Rhizomagastrodiae_C368-T07_good_19.600
SRR6049657Rhizomagastrodiae_C368-T07_good_110.570
SRR6049658Rhizomagastrodiae_C368-T04_good_111.600
SRR6049659Rhizomagastrodiae_C368-T04_good_112.840
SRR6049660Rhizomagastrodiae_C368-T01_good_19.150
SRR6049661Rhizomagastrodiae_C368-T04_good_111.250
SRR6049662Rhizomagastrodiae_C368-T01_good_17.150
SRR6049663Rhizomagastrodiae_C368-T01_good_18.440
SRR6049664Rhizomagastrodiae_C368-T10_good_15.600
SRR6049665Rhizomagastrodiae_C368-T10_good_15.600
SRP279888GastroGastrodia elata tuber 17.78
JuvenJuvenile tuber8.23
Mother_GastroMother tuber of Gastrodia elata 6.81
Mother_JuvenMother tuber of Juvenile 6.90