Detail information of GWHGAAEX012674/evm.TU.scaffold_44.231


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG30929.00E-146Casein kinase II, beta subunit
nrgi|672165247|ref|XP_008802520.1|1.58E-171PREDICTED: casein kinase II subunit beta-like isoform X1 [Phoenix dactylifera]
Swissprottr|P40228|CSK2B_ARATH3.00E-146Casein kinase II subunit beta
trEMBLtr|M0SS98|M0SS98_MUSAM5.00E-160Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr4P26360_001}
TAIRAT5G470809.00E-146casein kinase II beta chain 1

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000004555298605540560+
Transcript Sequence

Network for GWHGAAEX012674

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01214.17CK_II_beta982814.60E-82
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K03115CSNK2B Ribosome biogenesis in eukaryotes map03008
Wnt signaling pathwaymap04310
NF-kappa B signaling pathwaymap04064
Mitophagy - animalmap04137
Mitophagy - yeastmap04139
Adherens junctionmap04520
Circadian rhythm - plantmap04712

Gene Ontology

GO term OntologyName
GO:0019887Molecular Functionprotein kinase regulator activity
GO:0005956Cellular Componentprotein kinase CK2 complex

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms60.230
SRR2545915Juvenile tuber55.040
SRP108465SRR5643513five period of Gastrodia elata59.670
SRR5643514five period of Gastrodia elata59.600
SRR5643515five period of Gastrodia elata55.960
SRR5643524five period of Gastrodia elata55.140
SRR5643525five period of Gastrodia elata83.470
SRR5643528five period of Gastrodia elata71.850
SRR5643658five period of Gastrodia elata89.040
SRR5643659five period of Gastrodia elata65.780
SRR5643660five period of Gastrodia elata66.490
SRR5643661five period of Gastrodia elata68.920
SRR5643662five period of Gastrodia elata75.200
SRR5643663five period of Gastrodia elata60.570
SRR5643664five period of Gastrodia elata65.430
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_169.990
SRR6049655Rhizomagastrodiae_C368-T10_good_184.020
SRR6049656Rhizomagastrodiae_C368-T07_good_175.700
SRR6049657Rhizomagastrodiae_C368-T07_good_169.820
SRR6049658Rhizomagastrodiae_C368-T04_good_182.100
SRR6049659Rhizomagastrodiae_C368-T04_good_185.120
SRR6049660Rhizomagastrodiae_C368-T01_good_175.960
SRR6049661Rhizomagastrodiae_C368-T04_good_176.080
SRR6049662Rhizomagastrodiae_C368-T01_good_177.410
SRR6049663Rhizomagastrodiae_C368-T01_good_180.370
SRR6049664Rhizomagastrodiae_C368-T10_good_169.060
SRR6049665Rhizomagastrodiae_C368-T10_good_169.060
SRP279888GastroGastrodia elata tuber 78.03
JuvenJuvenile tuber79.77
Mother_GastroMother tuber of Gastrodia elata 90.19
Mother_JuvenMother tuber of Juvenile 70.96