Gene detail

Detail information of GWHGAAEX012691/evm.TU.scaffold_45.17

Functional Annotation

Database	Orthologs	E value	Annotation
KOG	KOG0903	4.00E-172	Phosphatidylinositol 4-kinase, involved in intracellular trafficking and secretion
nr	gi\|527204263\|gb\|EPS70479.1\|	0	hypothetical protein M569_04281, partial [Genlisea aurea]
Swissprot	tr\|Q9FMJ0\|P4KB1_ARATH	1.00E-172	Phosphatidylinositol 4-kinase beta 1
trEMBL	tr\|S8CT89\|S8CT89_9LAMI	0	Uncharacterized protein {ECO:0000313\|EMBL:EPS70479.1} (Fragment)
TAIR	AT5G64070	4.00E-172	phosphatidylinositol 4-OH kinase beta1

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000052	823479	833632	+

Transcript Sequence
>GWHTAAEX012691 ATGGTTCGCCTTCTCGGATTGAGGCGCTTCGGAGGCGACGACTCCCCGCGGGAGATCACCCGTACGATCCCCGTCGTAGGTGAGGGAGGGAGTGGGGAGAATGGTTGGCTTATCCGGTTCTTCGACTCGGCCTTCTTCTGCGAGTGGATCGCTGTCAGCTATCTGTACAAGCACGAGCACCCTGGAGTTCGGGATTATCTCTGCAACCGGATGTACACGCTGCCGCTCCCTGGTCTTGAGAGCTATCTCTTCCAGATCTGTTACATGCTGGTTCACAAACCGAGCCCGTCTCTTGACAAGTTTGTCATTGATACGTGCTCGAAATCTCTGCGGATCGCCCTCAAGGTGCACTGGTTTTTGATGGCGGAGCTCGAGGACTCAGAGGACAGTGAAGGCATCAGCAGGATCCAGGAAAAGTGCCAGATTGCCGCTACTCTGATGGGGGATTGGCCTCCGCTTATTCGTCCATCTCCGGGCTCTTCATCCACCTCCAAGGGCAACCCTATGCTCAGCCGGATACTGTCCTCTAAGCAGCGATCCCCACCGGCACTGGGTTCAGGGTCTCCGATTGAAGATAGCAATAATGGAAGTGCTGGACATGACTGTAATGGCAAGGCACTGACAGCCTCTGAAGAGGGAAAGCTGTTTAAAAGGCTCATGCCTGGGCCCAAGGTTCTTGAGGCTTTTTCATTTAGGAAGTCCGCCGAGAAGCAAGAGGATGAAACAGACAAAGATTGGTTTTTTCGAAGACTTCTTAGAGACAGCAAGGAGAAGGAGGATGGGATGGATAAAGATGGTATTCTTCGCCCGCTTCGTAGCAAGGAGAAAGATGAGGAACTGACATCGAGTTCTGAAAGTTTCCTCAAGAGATTCTTTCGTGATAAGGATGGTAAACTAGGGGAAGAGATGGAGGAGGATGGCTTTTTTCGTAAGATTTTCAAGGATAAGAATGAAGAAAGGAGAGATGCTGAGCACCATTACAAACATGGGGAAGAAGATACCTGCAATGGAAACATTGAGGAAGAGGAGAAGGAGAGTTTATTTAGGAGGTTGTTTAAAGAGAAGCATGATGAGAAGTTCGATGGTTTTCATGATAGTCAAGATGGTGAAGAAAAGGTTTGTAGGAGTGTTGATGAAGATGAAAAGGAAGGTTTTTTCCGCAGGCTATTGAAGGATAAGAATGATGAGAAAAAAGACGTTGACTTTAGAAACGAGGTGGTGCGGAGCATTAGGACTGCAGAAGATGATGACAAGGATGGCTTTTTTCGCAGAATTTTTAAGGATAAGAATGAAGAAAGAAGTGTTGCAATGCATGCCAGAAACAAAGATGAAGAAAGAATGGGCAAAGGTGTTGAGGATGATGACAAGGATGGCTTTTTTCGCAGAATATTTAAAGACAAGTCAGAAGAAAAAAGATTTTCAGGGCATTCTAGGAATGAGGACATAGAAAAGCTTAGCAAGAGTAATATGGATGATGAGAAGGATGGTTTCTTTCGCAAAATTTTTAAGGATAGAAATGAAGAGAAAAGAGATCCTGCACTTGAGAAGAATGGCGATGAAGAAAGGCTTAACAAGAGTATTGATGATGATGAGAAAGATGGCTTCTTGCGCCGAATTTTTAAAGAAAAGTCTGATGATAGGCGGGTTAGTGGACCCGAGAAGATTTCTGACGAAGAAAAGCCTAGCAGAAATACTGAAAATGATGAAAAGGAAAGTTTCTTTCGCAGAATATTCAAGGATAAGAATGATGAAAAAAGGGTTTCTGGGCATGAAAGGAATGATGGTGAAGAAAAGCTTAGCAAGGTTAATGATGATGATGTAAAGGATGGTTTTTTCCACAGAATTTTTAGGGATAAACATGATGAAAAAAAAGTTTTTGGGCATGAGAGGGTTGAGGAGGATGAAAAGGTGAGGAGTACCATTGATGATGTTGAAAGGGAAGGGTTTTTTCGTAGGCTTTTCAAGGATAAGCATGAAGACAAGAAAGATGAGGGGAATGATAGAAAACTAGAAGAGAACCAGAGTAATGCCTCTGTTGAGGAAGACGAGAGTTCTGAATTTTTATCATTCCGCAGGTTGTTTAGGGTACATCCTGAAGATAACAAGAATGCTTCTATGAATGATAACTCTGATTGTCCATCTGATAGCAGTCCTGGAACTGAGAACTTCTTTCGGAGGTTATTTCGTGATCGTGATCGGTCTATTGAAGATTTTGAGATTTTTGGTTCCAGAAAGCAGAAAGAACCACACCCTGGATCTCCAAGGCAACTAATGGAAAGATCATCCACAAAGCCACCTTTGCCAAACCATTTGATTTCACAATTTCGGAAAGGATCATATCATTCCTCGTTAGAGTTTGTTCAATGTTTATGTGACACGTCATATGGTTTGGTGGACATATTTCCTATTGATGACCGGAAAGTTGCTCTTCGGGAGTTCCTTCAGGAAATTAATTCTCAAATTTCAGATTCTCAAAAGGGTGGAGGACTGTGCTTTCCTATGGGAAAGGGGATGTATCGTGTCGTTCATATACCAGAGGACGAAGCTGTCCTTCTTAATTCAAGGGAGAAGGCACCTTACCTTATATGTGTTGAAGTTTTGAAATGTGAGTTGCTAAGCCAAACGAAGGCGACTGCTGATGTTCAAAAGCTTTCTAGAGGAATTATACCTCTAGCTAATGGTGATGTGCAGTCAATGAAGCCTCCTTCATGGGCTTATCCTCCATGGAGCCAACATCCAGTTCACCATTTTGATACCGATAGAATGTTGATAACTACATCACAAGCTATTGATGAGGCTATGACTCAGTTATGGGAAGCTAAAGTAAAATTTGTTCATGTTAGCTTATCGGTTGAGGATCAAATGTCTGGCTTGGTTGGGCATAGTGGACAAAATCATCCTGTATCTATTGATGATCTGAATAAGGATTATATTGGAAATACTGATGAAAATGTGGAAAGGGTAAGAGTCAGTTTGTCAGCCATTCCTGGGTTTAACATGGAAGATGTAGTTGATCAAGAAGCACCCCGTCGAAAAGAACATCGTCGTGTTCCCAGCACTATTGCCATTGAGGAAGTAAAGGCAAAAGCTGCTATTGGTCTAGCTCCTCCAGGACTCCCTTTAAAAGGTGCTGGTCAAAATCCACCAGACCAACAATCAAAGGTAGCAAATGGTGGATTTCCTAAACCAAGTGATGCGCTTTCTGGTGAATTATGGGAGGTCAAGAAAGAAAGGATACGCAGGTTGTCTCCATACGGGAAGGTGTCTAGCTGGGACTTGCGCTCTGGGGAGTTCAGGGGATCATGGATTATCATACAGCTAATCAGGATATCATAGCTACTGGTACTAATCATGACACCATTATTATCTAGCTAATTTTAATTGAGTCTGCATGAATTGTCGTACAGCTATTCATAACATGATATAATGTGTAATTTTTGGGGAGGTGATCCACACACTGTACTATACCAGTCATAAATTCTGTAGGCCGACTGCTTGTCAGACCTGTGGAAATAGGGGGGCATTGGCTGTTGCTCTGCTATCAGATAGTCATTGTTGTGAAAAAGTTGTAATCTATTTTTGGGTCTCCTTTGTTTACTGGTACCCAACTAACTTGAACTTTTAGTTATTTTGTTCCTACGCATCAGTTTATTTCTAAAAGATATCACTGTATAACTGTTTTGCAACAAATACTTTTTTATATTGAATAATTGTTAGCAC

Network for GWHGAAEX012691

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
--	--	--	--	--

Protein Sequence

>GWHPAAEX012691
MVRLLGLRRFGGDDSPREITRTIPVVGEGGSGENGWLIRFFDSAFFCEWIAVSYLYKHEHPGVRDYLCNRMYTLPLPGLESYLFQICYMLVHKPSPSLDKFVIDTCSKSLRIALKVHWFLMAELEDSEDSEGISRIQEKCQIAATLMGDWPPLIRPSPGSSSTSKGNPMLSRILSSKQRSPPALGSGSPIEDSNNGSAGHDCNGKALTASEEGKLFKRLMPGPKVLEAFSFRKSAEKQEDETDKDWFFRRLLRDSKEKEDGMDKDGILRPLRSKEKDEELTSSSESFLKRFFRDKDGKLGEEMEEDGFFRKIFKDKNEERRDAEHHYKHGEEDTCNGNIEEEEKESLFRRLFKEKHDEKFDGFHDSQDGEEKVCRSVDEDEKEGFFRRLLKDKNDEKKDVDFRNEVVRSIRTAEDDDKDGFFRRIFKDKNEERSVAMHARNKDEERMGKGVEDDDKDGFFRRIFKDKSEEKRFSGHSRNEDIEKLSKSNMDDEKDGFFRKIFKDRNEEKRDPALEKNGDEERLNKSIDDDEKDGFLRRIFKEKSDDRRVSGPEKISDEEKPSRNTENDEKESFFRRIFKDKNDEKRVSGHERNDGEEKLSKVNDDDVKDGFFHRIFRDKHDEKKVFGHERVEEDEKVRSTIDDVEREGFFRRLFKDKHEDKKDEGNDRKLEENQSNASVEEDESSEFLSFRRLFRVHPEDNKNASMNDNSDCPSDSSPGTENFFRRLFRDRDRSIEDFEIFGSRKQKEPHPGSPRQLMERSSTKPPLPNHLISQFRKGSYHSSLEFVQCLCDTSYGLVDIFPIDDRKVALREFLQEINSQISDSQKGGGLCFPMGKGMYRVVHIPEDEAVLLNSREKAPYLICVEVLKCELLSQTKATADVQKLSRGIIPLANGDVQSMKPPSWAYPPWSQHPVHHFDTDRMLITTSQAIDEAMTQLWEAKVKFVHVSLSVEDQMSGLVGHSGQNHPVSIDDLNKDYIGNTDENVERVRVSLSAIPGFNMEDVVDQEAPRRKEHRRVPSTIAIEEVKAKAAIGLAPPGLPLKGAGQNPPDQQSKVANGGFPKPSDALSGELWEVKKERIRRLSPYGKVSSWDLRSGEFRGSWIIIQLIRIS

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K19801	PI4KB	Metabolic pathways	map01100
		Inositol phosphate metabolism	map00562
		Phosphatidylinositol signaling system	map04070

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	32.300
SRP064423	SRR2545915	Juvenile tuber	27.080
SRP108465	SRR5643513	five period of Gastrodia elata	20.400
	SRR5643514	five period of Gastrodia elata	17.450
	SRR5643515	five period of Gastrodia elata	18.690
	SRR5643524	five period of Gastrodia elata	17.900
	SRR5643525	five period of Gastrodia elata	30.090
	SRR5643528	five period of Gastrodia elata	21.900
	SRR5643658	five period of Gastrodia elata	26.730
	SRR5643659	five period of Gastrodia elata	19.310
	SRR5643660	five period of Gastrodia elata	20.090
	SRR5643661	five period of Gastrodia elata	19.390
	SRR5643662	five period of Gastrodia elata	22.550
	SRR5643663	five period of Gastrodia elata	20.890
	SRR5643664	five period of Gastrodia elata	27.040
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	17.490
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	13.630
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	16.130
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	17.710
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	20.100
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	23.980
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	19.830
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	19.460
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	15.580
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	18.080
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	16.080
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	16.080
SRP279888	Gastro	Gastrodia elata tuber	19.83
	Juven	Juvenile tuber	24.67
	Mother_Gastro	Mother tuber of Gastrodia elata	16.92
	Mother_Juven	Mother tuber of Juvenile	32.35