Gene detail

Detail information of GWHGAAEX012692/evm.TU.scaffold_45.18

Functional Annotation

Database	Orthologs	E value	Annotation
nr	gi\|672125968\|ref\|XP_008786420.1\|	6.96E-40	PREDICTED: uncharacterized protein LOC103704774 [Phoenix dactylifera]
trEMBL	tr\|M0T9R1\|M0T9R1_MUSAM	1.00E-31	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr6P24150_001}
TAIR	AT3G26050	2.00E-11	TPX2 (targeting protein for Xklp2) protein family

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000052	877600	914288	+

Transcript Sequence
>GWHTAAEX012692 GAAGCCCGCACAGTGCCACAGTGGAGCGGTGACAACTGACGTCATATTCTTCAAGTCGACCTCACGGCCTCACGGCCTCACCCATTACTCCTTCCCTCGTTCTTTCGAGTACGCTTCATCGGAGGTTCAAGCTATTGGGAGTATCAAGAACTATTCGCTCATTCAGTTCTTTTCCCCTCCGCTTAAGTTCTGGATTCGGTCAATTCTGCGTGTGAATGCTCTAGGTAGGCTGGGCGAAGCTTTTCGGGTTTTTCCGCGGGATCTTGTTGGTTTGAGGGCGAGGTTCGTGATGCGAGATGGAAACGGATGTGAGTCATAGTTATGGTGGGTGGGCGCGCGAGGAATTGAATGGCCAGGATGACTCTAGGGAAATGTCAGTTTCTCAAATGCTTCATCACAGTTCCATATCATTTGGAAGATTTGCTCTTGCACCCTTGTCATGGGAAAAGAGATCAGTGTTTACTCGTAATAGATATCAAGAAGAGCTTGAGAACTTTAGGGCCCCAGGCTTGGTTGCACAAAAGAAAGCATTCTTTGAAGAATACTACAAAAGAATTCAAACTATGAAAGATTTGCAAGAGAACCAACATACTGATTCTGCATCAAATTGTAGTGACAATAATGGTATCACTGGACAGAAGGAAGAAGATCGGAGTGTTGTACCAAGCGAGAGTGATGGGAATGACATGGAAAAGACCATCGGTCATATTATAGAAAAAGCATCTAGCACTATTGATAATATTATCGGAGATGTGTCAACAGAAGCAACTTTTGATTTGGAAGATGCGTCAACAAAAGTAACTGCCTTAGTGGATGATTTTCCTCCAAATTCAAATCAGTGGAAAATATCTGACATTAATTCTTATCATCATGAGCGTATCATAAGTATTACAGATAGCAAACAAGGTGATTTTATAAGAGTTGAAAAAGAACTGGAGCCAGGGGGATTTGTATTAGAGAGCATCTCTCGACAGATTGGAGTAGAAAATCTGAGAATTGCTGAAAATAAGAGTTACGGGGATGAATTTGAATATATCTCTGATAGATACAAGATTTCAATTAAAGAACCCATGGGCATAGACGCTGAAACCACATTAGCTGAAGCTGGTCTACCTATAAAATCCCACAAAGGTTATAAAATGAATGCAAACGCTTACAATTTTAAGCAATCTCAATTATTGGTTCCTAAGTCATGTGATCATGAACCTAGCACTGAAAACATTGACGAGACTAAGAAGCTAGGCTTCAGAAACCAAGAGTATGAAAAGTTTTCAAAGAAATCTGTAAAGTCCAAGCATGATCGTGGACCTAGCACTGCAAGCGTTGATGACACTATGAAGCAAGTCTTCATAAGCCAAGAGTATAAAAACTTTTCAAAGAAATTTAAAAAATGCGGACAGAATATTTCTTGTTGTCCTACAAGTTCACCTAAATTTTTGGAGCTTAAGCTGAAGAAAGAACAAAAGAAAGTCAACCAAGTCGTTAAGGGGTTTAAGAGCAATGTATTTACTCCTCAGGTGGTGGAGAAGTCTTCTCAAAGTGAATATTCTGTGAAGTCAGAACTTAAAATCAAATCAGTAAGTGTTTTAGTGAAACAAGCTTTGTGTGATTCTTCTCAGATGAGAAACAGGAAGAGCACTTCTTGCAATGTTTCACATAAGCAAGCTATTGATAAAATTATGAGCAGCAAAGAAGCTGCAGTTGCTTCGCACGAGCCCAACAGGGAAGGCCCTTCCAAAATTACTACTCCTTGCCCATTTACTTTCACAGCTAGAAGAAAAAATGTCGCTTCTATAATTGCTACCCCAAGATCAGATACCAATTTTTTTTTGTCTTCATCATTACGTCTTTCTAAGAGCATCGATTCAAAGGGTGTATCAAGCAGGCTAGGAACATACCAGGGGGAAAAAAATGAAATCAGGGGCCGTGATGAACTTGAGAGAAAAGCTTTCATCGTCAATGGACAAGCAACCGACTTCAGAGGTGGAAATGCAAGCAATTTGATCAGCCCACTCAAAGCGAGATTTGTTACCAGTTGTAAAGGTTCTATGAATGCTGGAGCCAATTATAAGCTCGCAAGGATTAATGAAGTTGAAAAACGGAAGCTAATAAAAGTGGTTAATGAGGAATCTTGCTTGAAGGAAGTTGGAGAACATGGAAAATCTGCTATTTTATGTAATCTGCTGCAAACCCAAAAGCTTGATAATAAAAAGATGGATCCCTCCAAGGTAAAGGATTTATCATTCATTATGAAGAATTTGCAGCTTGGGGATGATTCATTGAACAGGAAGAAGAAACGCAGGCCAGAGAAGCCCCGGTGGCAGTAGATTGGCATTATAAACCTGTTTGCCATCGGCCAATAACAACCGTCGATTGTGCTTGTATATTGCTTTGAGAAGAACGAGGATAGATAATTTCCTGTTATTTCTTCTCCTATCCTTTTTTTTCTTGCTACCTGGGCACAAGCTATATGCCTTGGGTTAGTCATGTAAGAAATAAACTGTAGTTCCTGTTAAAGGCACGATGACTTATCTACGTGGAGTCTTAACAATATAACCTCTACTACCTTTAAGGGAGCACAATAACTGGATCGGCGGCAATTGCAGAAAATTCTAATGATGCCATAGCATTATGGCATGCGATTGGCATATGCTAGGGAGTTCTCATTAAGAGCGTTGCAGAATCAAGGACTTCTAGAAGGCATAAATTCTCATAAAATACTTTTTTGTAAATATTGTATTTTGGTAAGAAAACATGAACATTTTTTGGTGAGGCCAACACCAAAAGGATTTTATAGTACATACACATAGATGTTTGGGGACCAACGAGGACAACATCTTTTGATGGTCATAGATATTCTCTTTTATTGATGATTACTCCATGTTTGTTTGGGTGTATACCATAAAGAGCAAACTTAATGTACTAAAAATTTTTATAAATTAGAAGTGGGTTGAAAATCAGACCAAC

Network for GWHGAAEX012692

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
--	--	--	--	--

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	2.180
SRP064423	SRR2545915	Juvenile tuber	4.110
SRP108465	SRR5643513	five period of Gastrodia elata	6.680
	SRR5643514	five period of Gastrodia elata	6.060
	SRR5643515	five period of Gastrodia elata	8.040
	SRR5643524	five period of Gastrodia elata	6.730
	SRR5643525	five period of Gastrodia elata	3.710
	SRR5643528	five period of Gastrodia elata	1.700
	SRR5643658	five period of Gastrodia elata	2.520
	SRR5643659	five period of Gastrodia elata	6.300
	SRR5643660	five period of Gastrodia elata	6.450
	SRR5643661	five period of Gastrodia elata	7.830
	SRR5643662	five period of Gastrodia elata	5.680
	SRR5643663	five period of Gastrodia elata	5.290
	SRR5643664	five period of Gastrodia elata	3.730
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	2.970
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	3.600
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	3.430
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	2.830
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	1.510
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	1.950
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	1.910
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	3.070
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	2.720
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	1.670
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	4.310
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	4.310
SRP279888	Gastro	Gastrodia elata tuber	5.00
	Juven	Juvenile tuber	5.57
	Mother_Gastro	Mother tuber of Gastrodia elata	3.55
	Mother_Juven	Mother tuber of Juvenile	4.65