Detail information of GWHGAAEX012693/evm.TU.scaffold_45.19


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG01670FOG: Armadillo/beta-catenin-like repeats
nrgi|672116831|ref|XP_008781585.1|0PREDICTED: uncharacterized protein LOC103701338 [Phoenix dactylifera]
Swissprottr|Q8GUG9|PUB11_ARATH2.00E-11U-box domain-containing protein 11
trEMBLtr|F6H0K3|F6H0K3_VITVI0Putative uncharacterized protein {ECO:0000313|EMBL:CCB45475.1}
TAIRAT1G774600Armadillo/beta-catenin-like repeat ; C2 calcium/lipid-binding domain (CaLB) protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000052946669986628+
Transcript Sequence

Network for GWHGAAEX012693

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00514.22Arm5065410.00012
PF00168.29C2201121107.10E-12
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0005515Molecular Functionprotein binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms17.420
SRR2545915Juvenile tuber20.020
SRP108465SRR5643513five period of Gastrodia elata8.420
SRR5643514five period of Gastrodia elata9.010
SRR5643515five period of Gastrodia elata9.580
SRR5643524five period of Gastrodia elata7.990
SRR5643525five period of Gastrodia elata6.210
SRR5643528five period of Gastrodia elata4.210
SRR5643658five period of Gastrodia elata5.440
SRR5643659five period of Gastrodia elata13.050
SRR5643660five period of Gastrodia elata14.310
SRR5643661five period of Gastrodia elata11.230
SRR5643662five period of Gastrodia elata10.720
SRR5643663five period of Gastrodia elata12.450
SRR5643664five period of Gastrodia elata12.760
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_111.470
SRR6049655Rhizomagastrodiae_C368-T10_good_16.620
SRR6049656Rhizomagastrodiae_C368-T07_good_111.400
SRR6049657Rhizomagastrodiae_C368-T07_good_110.090
SRR6049658Rhizomagastrodiae_C368-T04_good_111.160
SRR6049659Rhizomagastrodiae_C368-T04_good_111.740
SRR6049660Rhizomagastrodiae_C368-T01_good_112.370
SRR6049661Rhizomagastrodiae_C368-T04_good_112.680
SRR6049662Rhizomagastrodiae_C368-T01_good_110.230
SRR6049663Rhizomagastrodiae_C368-T01_good_111.170
SRR6049664Rhizomagastrodiae_C368-T10_good_19.400
SRR6049665Rhizomagastrodiae_C368-T10_good_19.400
SRP279888GastroGastrodia elata tuber 10.74
JuvenJuvenile tuber12.43
Mother_GastroMother tuber of Gastrodia elata 5.31
Mother_JuvenMother tuber of Juvenile 7.53