Detail information of GWHGAAEX012707/evm.TU.scaffold_45.40


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|720001439|ref|XP_010256362.1|0PREDICTED: uncharacterized protein LOC104596775 [Nelumbo nucifera]
trEMBLtr|F6GY08|F6GY08_VITVI0Putative uncharacterized protein {ECO:0000313|EMBL:CCB44846.1}
TAIRAT4G096300Protein of unknown function (DUF616)

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000005216963931727650+
Transcript Sequence

Network for GWHGAAEX012707

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF04765.12DUF6163466646.20E-143
Protein Sequence

Gene family

Gene familysubfamily
Carbohydrate-Active enzymes FamilyGTnc
Carbohydrate-Active enzymes FamilyGTnc

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms45.610
SRR2545915Juvenile tuber43.920
SRP108465SRR5643513five period of Gastrodia elata37.700
SRR5643514five period of Gastrodia elata36.090
SRR5643515five period of Gastrodia elata36.870
SRR5643524five period of Gastrodia elata39.700
SRR5643525five period of Gastrodia elata52.420
SRR5643528five period of Gastrodia elata66.240
SRR5643658five period of Gastrodia elata53.010
SRR5643659five period of Gastrodia elata50.130
SRR5643660five period of Gastrodia elata49.720
SRR5643661five period of Gastrodia elata50.990
SRR5643662five period of Gastrodia elata47.100
SRR5643663five period of Gastrodia elata54.650
SRR5643664five period of Gastrodia elata42.270
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_146.060
SRR6049655Rhizomagastrodiae_C368-T10_good_149.610
SRR6049656Rhizomagastrodiae_C368-T07_good_146.650
SRR6049657Rhizomagastrodiae_C368-T07_good_144.690
SRR6049658Rhizomagastrodiae_C368-T04_good_141.250
SRR6049659Rhizomagastrodiae_C368-T04_good_145.670
SRR6049660Rhizomagastrodiae_C368-T01_good_146.760
SRR6049661Rhizomagastrodiae_C368-T04_good_143.890
SRR6049662Rhizomagastrodiae_C368-T01_good_145.910
SRR6049663Rhizomagastrodiae_C368-T01_good_149.220
SRR6049664Rhizomagastrodiae_C368-T10_good_145.700
SRR6049665Rhizomagastrodiae_C368-T10_good_145.700
SRP279888GastroGastrodia elata tuber 37.80
JuvenJuvenile tuber46.55
Mother_GastroMother tuber of Gastrodia elata 34.08
Mother_JuvenMother tuber of Juvenile 46.42