Gene detail

Detail information of GWHGAAEX012708/evm.TU.scaffold_45.42

Functional Annotation

Database	Orthologs	E value	Annotation
nr	gi\|672133214\|ref\|XP_008790216.1\|	2.67E-111	PREDICTED: uncharacterized protein LOC103707487 [Phoenix dactylifera]
trEMBL	tr\|A5BVU0\|A5BVU0_VITVI	3.00E-86	Putative uncharacterized protein {ECO:0000313\|EMBL:CAN81539.1}
TAIR	AT1G77500	2.00E-72	Protein of unknown function (DUF630 and DUF632)

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000052	1741786	1746566	-

Transcript Sequence
>GWHTAAEX012708 AAAACCTCAAAGGCGGTGCGCGAAACTGGTTTGACGATCATGGCGATGGATCGCGATTGAGAGAATACAAGCTTGAGATGGGATGCTGTTCTTCCAGGCCTGAGAAGTCGGAGCTCGTGGCTCTCTGCCGCAGCCGAAGAGCGCTTATCCGCAAAGCTATTGATTGCCGCTACGCTCTTGCCGCATCCCACACCGCTTATTTTCTCTCCCTCGCCTCCGTCGGCGAAGCGCTCCTCTGCTACGCTCTTGAAGGATTCCTGCCGAAGCCGAAGCCGAAGCCTATCGCCGACGCTGTCAGGCTGCCCGAATCGAGGAAGAGCACCGAAGTCGACGGAAGCGGGGGTTCATCTCCGATGTCATTGTCGCATTCGCTGTCTGACGAGGGCTTCCATCTCCATCTTTCCTCTGATTCCGAAGGGGTAACGGAAATCGGGAACGGGAAAATGGAGAACCAGGCAACCGTACATACTGCTAATTACAGCCACCATATGAGATCTTCCACGGAGATTCCCTACGTGGTTTACAGGGATCCGGATGTCGGTTTCTCCGATGATTACTTTAATGATCCTAATTACTACTATAATCGGTCCGTTAGCCCTCCTCAACAGCCTAGGGTTTCTTCTCCTTTTCAGCCTCCCGGTGGTTACCAGGGCTCTGCCTGGGAGTTTTTCAATCCCTTTTTTTCGTATGAGCAGTTTCTGCCTGGAAATTATCCTATTGAGTACGGAGCAGCATCGGTGGGAAGCAGTCTGGATTCGAGCGAGGTTAGACTACGCGAAGGTATTCCTGATCTGGAGGATGTAACGGATTCGGAATCTATTATTAAAAATAAAAAGGGGAAGATGATAGCTGAAGAGTTTGAAGTAAAGGGTACAAGTTTTGATAACTCCAAAAATGTGGAGGCAAAGGAGACTGAAGAAATTGAGGAGACAGAGAAAATGAAATGTTTCGGGGATATGACGAGTGAAACTAGCTCCACTGAGGTCGAGACAAATGGAAGTTCGGAGACCGGCTTAGACGGTAGCGGTGAAGAGCAAGGAATGAGCAGCAAGAAGAAAGATGTGGAGTTTGGAAATGGAAACTCTTTGGTGAGTGAGAGGTCCGAAACAAAGGTTGAAGGCAACATGGATGTTCTGGAAGCCTTGCGGGTTATTAATCTAGAGTTTGAGTCTGTAATTACTGGCAGTAAAGAGGTTTCCATGTTGCTAGAGACAGGGAAAAGGAGGCATTGGCGAAGAAACAAAGTGTTTAAAGTGATCTCCTCCAGGATTTTATTTTTCATTGGTTCCCGGGTTTCTTTACGCCGCCTTTTCAAGCGTAGACGCCATTTGGCAGCAACAATAATGAAGAGCAAATCTACCAATGTAGAATTGGAGAAACTTGCTAATATGAAGTTTAATTTCCTCTCATCAACATTGGAGAAACTGTATTTATGGGAAAAGAAACTTTATGAGGAAGTTAAGGCTGAAGAAAGATTGCGTGCTATCTATGAGAAGAAGATGAAGAGGCTACAATCGCAGGATGACGAAAGGATCAACGTGCCTGGAGCCTCAGAAAGCCTTTTGCGCACCAAGCTGAGCATTGCAATCACTTGTGCCGACGTTATCTCAAGAAGAATCCGCGAGATAATTAGCAAAGACTTGCAGCCTCAGCTAGTGGAACTGATACGAGGACTAGCCAACATGTGGAAATTGCTGGTGGCCTGTCATTCCAAGCAGCTGCTTTCCCTAGCCTACAGCAAAACCCTAAGCCCAAGGATTGGCTCTCCCTCTCCATTCCAGGACTCGGTCACAAATGATCTCACGCTCGCGCTCTTCGCCTGGCACGCAAATTTCGACCAATGGATGGCCTCGCAGCGAGCCTTCGTCGGCGCGCTGAACCAATGGCTGCGGAAATGGCTTCCCAAGCACCGCGAAGAAGGAGCTCCTCCTGCTTTCCTCCTCACCAAGAGCTGGTCCGAAGCCCTGAACCGGCTTCCAGAAGCCGACGTCAAAGCCGCTATCCGGAGCTTCGCCGCCGATATGCGCGTCGAGGAGCGGAAGCTTCTGATGACCGCTAAGCTGAGCCGTCCGCTGCAGGAGCAGCATCCATCGCTGAAGGAAAATCACGTCCAGGCCATCGGAAGAGCCGGAGAAGCTGCCTCCGCCTGTTTGGCAAACGGTATGTTTCCGATTCTCAAATCGCTGCACGTTTTTGCGTCCGAGATTTTGCGGGCGCACGAAGCGCTTCTGATGACTCCTTAG

Network for GWHGAAEX012708

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF04783.11	DUF630	1	56	1.00E-19
PF04782.11	DUF632	353	650	8.20E-69

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	0.570
SRP064423	SRR2545915	Juvenile tuber	0.490
SRP108465	SRR5643513	five period of Gastrodia elata	0.170
	SRR5643514	five period of Gastrodia elata	0.100
	SRR5643515	five period of Gastrodia elata	0.390
	SRR5643524	five period of Gastrodia elata	0.170
	SRR5643525	five period of Gastrodia elata	0.800
	SRR5643528	five period of Gastrodia elata	2.170
	SRR5643658	five period of Gastrodia elata	1.080
	SRR5643659	five period of Gastrodia elata	0.400
	SRR5643660	five period of Gastrodia elata	0.650
	SRR5643661	five period of Gastrodia elata	0.850
	SRR5643662	five period of Gastrodia elata	0.550
	SRR5643663	five period of Gastrodia elata	0.280
	SRR5643664	five period of Gastrodia elata	0.460
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	0.230
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	0.000
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	0.290
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	0.130
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	0.400
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	0.370
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	0.320
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	0.340
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	0.070
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	0.410
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	0.130
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	0.130
SRP279888	Gastro	Gastrodia elata tuber	0.96
	Juven	Juvenile tuber	0.83
	Mother_Gastro	Mother tuber of Gastrodia elata	2.28
	Mother_Juven	Mother tuber of Juvenile	1.19